Project name: query_structure

Status: done

Started: 2026-03-16 23:35:25
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDAPANSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYEWYGWGWTYSPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-2.3622
Maximal score value
2.0463
Average score
-0.1811
Total score value
-17.386

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4279
2 S A -0.1934
3 S A 0.4931
4 V A 1.5411
5 S A 0.7001
6 S A 0.8337
7 V A 0.7541
8 P A 0.0000
9 T A -1.2122
10 K A -2.3225
11 L A -1.4562
12 E A -1.7635
13 V A 0.1098
14 V A 1.5453
15 A A 0.8848
16 A A 0.2938
17 T A -0.1994
18 P A -0.8031
19 T A -0.5342
20 S A -0.3171
21 L A 0.0000
22 L A 0.7171
23 I A 0.0000
24 S A -0.5197
25 W A 0.0000
26 D A -1.4609
27 A A -0.6130
28 P A 0.0000
29 A A -0.0158
30 N A -0.0878
31 S A -0.0667
32 V A 0.3813
33 S A 0.3611
34 Y A 0.4695
35 Y A 0.0000
36 R A -0.2887
37 I A 0.0000
38 T A 0.0000
39 Y A -0.4139
40 G A 0.0000
41 E A -1.3824
42 T A -1.2335
43 G A -1.2365
44 G A -1.3629
45 N A -1.5513
46 S A -0.9299
47 P A -0.4260
48 V A 0.2662
49 Q A -1.1898
50 E A -1.7765
51 F A -0.6401
52 T A -0.1712
53 V A 0.0713
54 P A -0.1978
55 G A -0.1325
56 S A -0.2827
57 S A -0.2641
58 S A -0.3726
59 T A -0.1056
60 A A 0.0000
61 T A 0.2443
62 I A 0.0000
63 S A -0.4747
64 G A -0.6857
65 L A 0.0000
66 S A -0.8394
67 P A -0.9938
68 G A -1.0909
69 V A -0.9631
70 D A -1.8851
71 Y A 0.0000
72 T A -0.7963
73 I A 0.0000
74 T A -0.2794
75 V A 0.0000
76 Y A 0.5232
77 A A 0.0000
78 Y A 1.3548
79 E A 0.0000
80 W A 2.0463
81 Y A 1.4896
82 G A 0.7860
83 W A 1.4826
84 G A 1.3131
85 W A 1.9668
86 T A 1.7048
87 Y A 1.8912
88 S A 0.0000
89 P A 0.3048
90 S A 0.0038
91 S A -0.5118
92 I A -0.6253
93 N A -1.7591
94 Y A -1.4981
95 R A -2.3622
96 T A -1.2033
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Laboratory of Theory of Biopolymers 2018