| Chain sequence(s) |
A: MARTKQTARKSTGGKAPRKQLATKVCPFSIFFCLRVF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4107 | |
| 2 | A | A | -0.9024 | |
| 3 | R | A | -2.2167 | |
| 4 | T | A | -2.2340 | |
| 5 | K | A | -3.4021 | |
| 6 | Q | A | -3.3286 | |
| 7 | T | A | -2.6267 | |
| 8 | A | A | -2.6780 | |
| 9 | R | A | -3.7434 | |
| 10 | K | A | -3.6243 | |
| 11 | S | A | -2.5020 | |
| 12 | T | A | -1.8351 | |
| 13 | G | A | -1.9743 | |
| 14 | G | A | -1.9955 | |
| 15 | K | A | -2.4443 | |
| 16 | A | A | -2.0278 | |
| 17 | P | A | -2.1722 | |
| 18 | R | A | -2.8690 | |
| 19 | K | A | -2.9533 | |
| 20 | Q | A | -2.0332 | |
| 21 | L | A | -0.2339 | |
| 22 | A | A | 0.1538 | |
| 23 | T | A | -0.2139 | |
| 24 | K | A | -0.8385 | |
| 25 | V | A | 1.6510 | |
| 26 | C | A | 2.1005 | |
| 27 | P | A | 2.0989 | |
| 28 | F | A | 3.9833 | |
| 29 | S | A | 3.1727 | |
| 30 | I | A | 3.8763 | |
| 31 | F | A | 4.7413 | |
| 32 | F | A | 4.5687 | |
| 33 | C | A | 3.8827 | |
| 34 | L | A | 3.8448 | |
| 35 | R | A | 1.8788 | |
| 36 | V | A | 3.1983 | |
| 37 | F | A | 3.3690 |