| Chain sequence(s) |
A: ECRYLFGGCKTTSDCCKHLGCKFRDKYCAWDFTFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.6941 | |
| 2 | C | A | -0.7035 | |
| 3 | R | A | -0.4877 | |
| 4 | Y | A | 1.2871 | |
| 5 | L | A | 2.0628 | |
| 6 | F | A | 2.1319 | |
| 7 | G | A | 0.4133 | |
| 8 | G | A | -0.9923 | |
| 9 | C | A | 0.0000 | |
| 10 | K | A | -2.1740 | |
| 11 | T | A | -1.1141 | |
| 12 | T | A | -0.9112 | |
| 13 | S | A | -1.0624 | |
| 14 | D | A | -1.4167 | |
| 15 | C | A | -0.7126 | |
| 16 | C | A | -0.7470 | |
| 17 | K | A | -1.7394 | |
| 18 | H | A | -1.0370 | |
| 19 | L | A | 0.0000 | |
| 20 | G | A | 0.0000 | |
| 21 | C | A | 0.0000 | |
| 22 | K | A | -1.3439 | |
| 23 | F | A | -0.2251 | |
| 24 | R | A | -2.0219 | |
| 25 | D | A | -1.9118 | |
| 26 | K | A | -2.4241 | |
| 27 | Y | A | -0.6194 | |
| 28 | C | A | 0.0000 | |
| 29 | A | A | 0.4338 | |
| 30 | W | A | 0.4549 | |
| 31 | D | A | -0.7294 | |
| 32 | F | A | 1.0767 | |
| 33 | T | A | 1.3375 | |
| 34 | F | A | 1.9731 | |
| 35 | S | A | 0.9244 |