| Chain sequence(s) |
A: AAQLTQSPSSLSASVGDRVTITCRASQDISSALVWEQQKPGKAPKLLIYDASSLESGVPSRFSGSESGTDFTLTISSLQPEDFATYYCQQFNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSQVILISPGGGVCQPGRSLRLSCTCSGFTFSTYGMHWVRQAPGKGLEWVAVIWDDGSYKYKGDSVKGRFTISRSNSKNTLYLQTNSLRASDTAYYYCARDGITMVRGVMKDYFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:43)
[INFO] Main: Simulation completed successfully. (00:03:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.0585 | |
| 2 | A | A | 0.0000 | |
| 3 | Q | A | -1.1703 | |
| 4 | L | A | -0.0839 | |
| 5 | T | A | -0.2514 | |
| 6 | Q | A | -0.1716 | |
| 7 | S | A | -0.2497 | |
| 8 | P | A | -0.1914 | |
| 9 | S | A | -0.2685 | |
| 10 | S | A | -0.3451 | |
| 11 | L | A | 0.1877 | |
| 12 | S | A | -0.3204 | |
| 13 | A | A | -0.0436 | |
| 14 | S | A | 0.0164 | |
| 15 | V | A | 1.2968 | |
| 16 | G | A | -0.3197 | |
| 17 | D | A | -1.3073 | |
| 18 | R | A | -2.0228 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.0694 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.0233 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -1.9005 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.3914 | |
| 27 | Q | A | -1.3196 | |
| 28 | D | A | -1.9534 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.0422 | |
| 31 | S | A | -0.0795 | |
| 32 | A | A | 0.0000 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | E | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -0.5204 | |
| 40 | P | A | -0.4318 | |
| 41 | G | A | -0.8322 | |
| 42 | K | A | -1.7855 | |
| 43 | A | A | -0.3080 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.5559 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.2023 | |
| 50 | D | A | -0.2741 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.2329 | |
| 53 | S | A | -0.0093 | |
| 54 | L | A | 0.4342 | |
| 55 | E | A | -0.3862 | |
| 56 | S | A | -0.3795 | |
| 57 | G | A | -0.4709 | |
| 58 | V | A | 0.0775 | |
| 59 | P | A | -0.1210 | |
| 60 | S | A | -0.2945 | |
| 61 | R | A | -0.3709 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.1563 | |
| 64 | G | A | -0.1478 | |
| 65 | S | A | -0.4579 | |
| 66 | E | A | -1.3303 | |
| 67 | S | A | -0.5296 | |
| 68 | G | A | -0.5082 | |
| 69 | T | A | -0.1813 | |
| 70 | D | A | -0.6337 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.0195 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.0230 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -0.3256 | |
| 77 | S | A | -0.1820 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.5949 | |
| 80 | P | A | -0.6330 | |
| 81 | E | A | -1.5557 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | 0.6299 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.1621 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | F | A | 0.0000 | |
| 92 | N | A | -0.3113 | |
| 93 | S | A | -0.1852 | |
| 94 | Y | A | 0.1690 | |
| 95 | P | A | 0.0238 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | 0.0294 | |
| 98 | F | A | 0.2039 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -0.4663 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.1154 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.1912 | |
| 106 | I | A | -0.1221 | |
| 107 | K | A | -1.7169 | |
| 108 | G | A | -0.8646 | |
| 109 | G | A | -0.6374 | |
| 110 | G | A | -0.6356 | |
| 111 | G | A | -0.5893 | |
| 112 | S | A | -0.3827 | |
| 113 | G | A | -0.5945 | |
| 114 | G | A | -0.6459 | |
| 115 | G | A | -0.6476 | |
| 116 | G | A | -0.5971 | |
| 117 | S | A | -0.3840 | |
| 118 | G | A | -0.5995 | |
| 119 | G | A | -0.6532 | |
| 120 | G | A | -0.6436 | |
| 121 | G | A | -0.5914 | |
| 122 | S | A | -0.5215 | |
| 123 | Q | A | -0.9083 | |
| 124 | V | A | 1.9106 | |
| 125 | I | A | 2.6174 | |
| 126 | L | A | 2.2927 | |
| 127 | I | A | 2.2594 | |
| 128 | S | A | 0.1091 | |
| 129 | P | A | -0.3778 | |
| 130 | G | A | -0.5931 | |
| 131 | G | A | -0.6340 | |
| 132 | G | A | -0.2333 | |
| 133 | V | A | 1.7134 | |
| 134 | C | A | 0.2426 | |
| 135 | Q | A | -1.1806 | |
| 136 | P | A | -0.3423 | |
| 137 | G | A | -0.8260 | |
| 138 | R | A | -1.9702 | |
| 139 | S | A | -0.7546 | |
| 140 | L | A | -0.2269 | |
| 141 | R | A | -1.8628 | |
| 142 | L | A | 0.0000 | |
| 143 | S | A | -0.1967 | |
| 144 | C | A | 0.0000 | |
| 145 | T | A | -0.0709 | |
| 146 | C | A | 0.0000 | |
| 147 | S | A | -0.2945 | |
| 148 | G | A | -0.4283 | |
| 149 | F | A | 0.2998 | |
| 150 | T | A | 0.0020 | |
| 151 | F | A | 0.0000 | |
| 152 | S | A | -0.1231 | |
| 153 | T | A | -0.0235 | |
| 154 | Y | A | 0.3600 | |
| 155 | G | A | 0.0000 | |
| 156 | M | A | 0.0000 | |
| 157 | H | A | 0.0000 | |
| 158 | W | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | R | A | 0.0000 | |
| 161 | Q | A | -0.0613 | |
| 162 | A | A | -0.0460 | |
| 163 | P | A | -0.2934 | |
| 164 | G | A | -0.8303 | |
| 165 | K | A | -1.8320 | |
| 166 | G | A | -0.5449 | |
| 167 | L | A | 0.0000 | |
| 168 | E | A | -0.6658 | |
| 169 | W | A | 0.0000 | |
| 170 | V | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | V | A | 0.0000 | |
| 173 | I | A | 0.0000 | |
| 174 | W | A | 0.6384 | |
| 175 | D | A | -0.8188 | |
| 176 | D | A | -1.9298 | |
| 177 | G | A | -0.5021 | |
| 178 | S | A | -0.1436 | |
| 179 | Y | A | 0.2386 | |
| 180 | K | A | -0.9552 | |
| 181 | Y | A | 0.2063 | |
| 182 | K | A | -0.2818 | |
| 183 | G | A | 0.0000 | |
| 184 | D | A | -1.8098 | |
| 185 | S | A | -0.4428 | |
| 186 | V | A | 0.0000 | |
| 187 | K | A | -1.7863 | |
| 188 | G | A | -0.8745 | |
| 189 | R | A | -0.5906 | |
| 190 | F | A | 0.0000 | |
| 191 | T | A | -0.0800 | |
| 192 | I | A | 0.0000 | |
| 193 | S | A | -0.0742 | |
| 194 | R | A | -0.2415 | |
| 195 | S | A | -0.2019 | |
| 196 | N | A | -0.8213 | |
| 197 | S | A | -0.6565 | |
| 198 | K | A | -1.8514 | |
| 199 | N | A | -0.9916 | |
| 200 | T | A | 0.0000 | |
| 201 | L | A | 0.0000 | |
| 202 | Y | A | 0.1057 | |
| 203 | L | A | 0.0000 | |
| 204 | Q | A | -0.6179 | |
| 205 | T | A | 0.0000 | |
| 206 | N | A | -1.3341 | |
| 207 | S | A | -0.4274 | |
| 208 | L | A | 0.0000 | |
| 209 | R | A | -1.2612 | |
| 210 | A | A | -0.2447 | |
| 211 | S | A | -0.2070 | |
| 212 | D | A | 0.0000 | |
| 213 | T | A | -0.0189 | |
| 214 | A | A | 0.0000 | |
| 215 | Y | A | 0.6615 | |
| 216 | Y | A | 0.0000 | |
| 217 | Y | A | 0.0000 | |
| 218 | C | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | R | A | -0.2655 | |
| 221 | D | A | 0.0000 | |
| 222 | G | A | 0.0000 | |
| 223 | I | A | 1.6002 | |
| 224 | T | A | 0.4789 | |
| 225 | M | A | 1.1047 | |
| 226 | V | A | 0.0000 | |
| 227 | R | A | -1.9295 | |
| 228 | G | A | -0.5237 | |
| 229 | V | A | 1.6301 | |
| 230 | M | A | 1.3913 | |
| 231 | K | A | -0.1093 | |
| 232 | D | A | -0.0638 | |
| 233 | Y | A | 0.0968 | |
| 234 | F | A | 0.0000 | |
| 235 | D | A | -0.2127 | |
| 236 | Y | A | 0.6892 | |
| 237 | W | A | 0.0000 | |
| 238 | G | A | 0.0000 | |
| 239 | Q | A | -1.2427 | |
| 240 | G | A | -0.4657 | |
| 241 | T | A | 0.1206 | |
| 242 | L | A | 1.0743 | |
| 243 | V | A | 0.0000 | |
| 244 | T | A | -0.0435 | |
| 245 | V | A | 0.0000 | |
| 246 | S | A | -0.1527 | |
| 247 | S | A | -0.2338 |