Project name: query_structure

Status: done

Started: 2026-03-17 01:09:09
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAMKNDEDVQYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAGVSSYYYYWGSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:42)
Show buried residues

Minimal score value
-3.6969
Maximal score value
3.0353
Average score
-0.658
Total score value
-63.1664

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.3909
2 S A -0.2404
3 D A -1.3980
4 V A -1.1818
5 P A 0.0000
6 R A -3.6239
7 D A -3.6162
8 L A 0.0000
9 E A -2.2052
10 V A 0.0781
11 V A 1.5216
12 A A 0.8862
13 A A 0.2990
14 T A -0.5371
15 P A -1.1441
16 T A -1.0009
17 S A -0.5383
18 L A 0.0000
19 L A 0.7275
20 I A 0.0000
21 S A -1.0297
22 W A 0.0000
23 D A -3.4540
24 A A -2.3195
25 M A -2.6953
26 K A -3.1854
27 N A -3.1830
28 D A -3.2679
29 E A -3.6969
30 D A -3.3154
31 V A -2.1441
32 Q A -1.8605
33 Y A -0.5395
34 Y A 0.0000
35 R A -0.3516
36 I A 0.0000
37 T A 0.0000
38 Y A -0.3108
39 G A 0.0000
40 E A -1.4994
41 T A -1.2188
42 G A -1.2176
43 G A -1.3243
44 N A -1.5135
45 S A -0.8022
46 P A -0.3041
47 V A 0.4578
48 Q A -0.8373
49 E A -1.6059
50 F A -0.6492
51 T A -0.2616
52 V A 0.0000
53 P A -0.5607
54 G A -1.2511
55 S A -0.9076
56 S A -0.5655
57 S A -0.6155
58 T A -0.3007
59 A A 0.0000
60 T A 0.2852
61 I A 0.0000
62 S A -0.6602
63 G A -1.0335
64 L A 0.0000
65 K A -2.3670
66 P A -1.6600
67 G A -1.4426
68 V A -1.4300
69 D A -2.0612
70 Y A 0.0000
71 T A -0.7242
72 I A 0.0000
73 T A -0.1752
74 V A 0.0000
75 Y A 0.3466
76 A A 0.0000
77 G A 0.0000
78 V A -0.2618
79 S A 0.1437
80 S A 0.9780
81 Y A 2.2670
82 Y A 2.9838
83 Y A 3.0353
84 Y A 2.8836
85 W A 1.9688
86 G A 0.3534
87 S A -0.2162
88 S A -0.3432
89 P A -0.3300
90 I A -0.3653
91 S A -0.5468
92 I A -0.7076
93 N A -1.7054
94 Y A -1.4396
95 R A -2.5168
96 T A -1.5118
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Laboratory of Theory of Biopolymers 2018