| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAMKNDEDVQYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAGVSSYYYYWGSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3909 | |
| 2 | S | A | -0.2404 | |
| 3 | D | A | -1.3980 | |
| 4 | V | A | -1.1818 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.6239 | |
| 7 | D | A | -3.6162 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.2052 | |
| 10 | V | A | 0.0781 | |
| 11 | V | A | 1.5216 | |
| 12 | A | A | 0.8862 | |
| 13 | A | A | 0.2990 | |
| 14 | T | A | -0.5371 | |
| 15 | P | A | -1.1441 | |
| 16 | T | A | -1.0009 | |
| 17 | S | A | -0.5383 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7275 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.0297 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.4540 | |
| 24 | A | A | -2.3195 | |
| 25 | M | A | -2.6953 | |
| 26 | K | A | -3.1854 | |
| 27 | N | A | -3.1830 | |
| 28 | D | A | -3.2679 | |
| 29 | E | A | -3.6969 | |
| 30 | D | A | -3.3154 | |
| 31 | V | A | -2.1441 | |
| 32 | Q | A | -1.8605 | |
| 33 | Y | A | -0.5395 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -0.3516 | |
| 36 | I | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | Y | A | -0.3108 | |
| 39 | G | A | 0.0000 | |
| 40 | E | A | -1.4994 | |
| 41 | T | A | -1.2188 | |
| 42 | G | A | -1.2176 | |
| 43 | G | A | -1.3243 | |
| 44 | N | A | -1.5135 | |
| 45 | S | A | -0.8022 | |
| 46 | P | A | -0.3041 | |
| 47 | V | A | 0.4578 | |
| 48 | Q | A | -0.8373 | |
| 49 | E | A | -1.6059 | |
| 50 | F | A | -0.6492 | |
| 51 | T | A | -0.2616 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | -0.5607 | |
| 54 | G | A | -1.2511 | |
| 55 | S | A | -0.9076 | |
| 56 | S | A | -0.5655 | |
| 57 | S | A | -0.6155 | |
| 58 | T | A | -0.3007 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.2852 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6602 | |
| 63 | G | A | -1.0335 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.3670 | |
| 66 | P | A | -1.6600 | |
| 67 | G | A | -1.4426 | |
| 68 | V | A | -1.4300 | |
| 69 | D | A | -2.0612 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.7242 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | -0.1752 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | 0.3466 | |
| 76 | A | A | 0.0000 | |
| 77 | G | A | 0.0000 | |
| 78 | V | A | -0.2618 | |
| 79 | S | A | 0.1437 | |
| 80 | S | A | 0.9780 | |
| 81 | Y | A | 2.2670 | |
| 82 | Y | A | 2.9838 | |
| 83 | Y | A | 3.0353 | |
| 84 | Y | A | 2.8836 | |
| 85 | W | A | 1.9688 | |
| 86 | G | A | 0.3534 | |
| 87 | S | A | -0.2162 | |
| 88 | S | A | -0.3432 | |
| 89 | P | A | -0.3300 | |
| 90 | I | A | -0.3653 | |
| 91 | S | A | -0.5468 | |
| 92 | I | A | -0.7076 | |
| 93 | N | A | -1.7054 | |
| 94 | Y | A | -1.4396 | |
| 95 | R | A | -2.5168 | |
| 96 | T | A | -1.5118 |