| Chain sequence(s) |
A: GKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKRPQYMRYVIKGGMIIILLCSVAVTVLSAINVGKSIMFAMTPLLIATSSLMPFIGFLLGYVLSALFCLNGRCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPLLYMIFQLGEGLLLIAIFWCYEKFK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:23)
[INFO] Main: Simulation completed successfully. (00:04:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 19 | G | A | -1.6216 | |
| 20 | K | A | -2.2126 | |
| 21 | R | A | -1.8061 | |
| 22 | P | A | -0.7833 | |
| 23 | T | A | -0.2129 | |
| 24 | D | A | -0.3317 | |
| 25 | L | A | 0.9967 | |
| 26 | A | A | 1.1615 | |
| 27 | L | A | 1.6657 | |
| 28 | S | A | 1.6813 | |
| 29 | V | A | 2.5142 | |
| 30 | I | A | 2.5780 | |
| 31 | L | A | 2.5076 | |
| 32 | V | A | 3.0782 | |
| 33 | F | A | 3.6254 | |
| 34 | M | A | 3.0371 | |
| 35 | L | A | 2.3268 | |
| 36 | F | A | 2.5599 | |
| 37 | F | A | 2.4517 | |
| 38 | I | A | 1.7580 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 1.2401 | |
| 41 | S | A | 0.6661 | |
| 42 | L | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | C | A | -0.0053 | |
| 45 | T | A | -0.1883 | |
| 46 | M | A | 0.0000 | |
| 47 | E | A | -1.0726 | |
| 48 | F | A | -0.1168 | |
| 49 | S | A | -0.9591 | |
| 50 | K | A | -1.6840 | |
| 51 | I | A | -0.6326 | |
| 52 | K | A | -0.9473 | |
| 53 | A | A | -0.7312 | |
| 54 | H | A | -0.7599 | |
| 55 | L | A | 0.0359 | |
| 56 | W | A | 0.0930 | |
| 57 | K | A | -1.4345 | |
| 58 | P | A | -1.0204 | |
| 59 | K | A | -1.1425 | |
| 60 | G | A | 0.0000 | |
| 61 | L | A | -0.0089 | |
| 62 | A | A | 0.1008 | |
| 63 | I | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | L | A | 1.2079 | |
| 66 | V | A | 1.9747 | |
| 67 | A | A | 0.0000 | |
| 68 | Q | A | 0.0000 | |
| 69 | Y | A | 0.0000 | |
| 70 | G | A | 0.7202 | |
| 71 | I | A | 1.1974 | |
| 72 | M | A | 0.0000 | |
| 73 | P | A | 0.0000 | |
| 74 | L | A | 1.5586 | |
| 75 | T | A | 1.0175 | |
| 76 | A | A | 0.0000 | |
| 77 | F | A | 1.5995 | |
| 78 | V | A | 1.5382 | |
| 79 | L | A | 1.0171 | |
| 80 | G | A | -0.1279 | |
| 81 | K | A | -0.7319 | |
| 82 | V | A | 1.0774 | |
| 83 | F | A | 0.1333 | |
| 84 | R | A | -1.7828 | |
| 85 | L | A | -1.4484 | |
| 86 | K | A | -2.3254 | |
| 87 | N | A | -1.8999 | |
| 88 | I | A | -0.5476 | |
| 89 | E | A | 0.0000 | |
| 90 | A | A | -0.7822 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | L | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | P | A | 0.0000 | |
| 101 | G | A | 0.0000 | |
| 102 | G | A | -0.3302 | |
| 103 | N | A | 0.0965 | |
| 104 | L | A | 0.5525 | |
| 105 | S | A | 0.0000 | |
| 106 | N | A | 0.0000 | |
| 107 | V | A | 1.0796 | |
| 108 | F | A | 0.0000 | |
| 109 | S | A | 0.0000 | |
| 110 | L | A | 0.7081 | |
| 111 | A | A | 0.4139 | |
| 112 | M | A | 0.0000 | |
| 113 | K | A | -1.9460 | |
| 114 | G | A | -1.7536 | |
| 115 | D | A | 0.0000 | |
| 116 | M | A | 0.0000 | |
| 117 | N | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | S | A | 0.0000 | |
| 120 | I | A | 0.0000 | |
| 121 | V | A | 0.0000 | |
| 122 | M | A | 0.0000 | |
| 123 | T | A | 0.0000 | |
| 124 | T | A | 0.8142 | |
| 125 | C | A | 1.0527 | |
| 126 | S | A | 0.0000 | |
| 127 | T | A | 1.1720 | |
| 128 | F | A | 2.3005 | |
| 129 | C | A | 1.3437 | |
| 130 | A | A | 0.0000 | |
| 131 | L | A | 0.9109 | |
| 132 | G | A | 0.4214 | |
| 133 | M | A | 0.6530 | |
| 134 | M | A | 0.0000 | |
| 135 | P | A | 0.1064 | |
| 136 | L | A | 1.5687 | |
| 137 | L | A | 0.0000 | |
| 138 | L | A | 0.0000 | |
| 139 | Y | A | 1.3731 | |
| 140 | I | A | 2.1116 | |
| 141 | Y | A | 1.2919 | |
| 142 | S | A | 0.0000 | |
| 143 | R | A | -1.5610 | |
| 144 | G | A | -1.5334 | |
| 145 | I | A | -1.3033 | |
| 146 | Y | A | -1.5713 | |
| 147 | D | A | -2.5912 | |
| 148 | G | A | -2.2992 | |
| 149 | D | A | -3.0616 | |
| 150 | L | A | 0.0000 | |
| 151 | K | A | -2.1031 | |
| 152 | D | A | -2.8344 | |
| 153 | K | A | -1.8405 | |
| 154 | V | A | 0.0000 | |
| 155 | P | A | -0.5393 | |
| 156 | Y | A | -0.3660 | |
| 157 | K | A | -0.9613 | |
| 158 | G | A | -0.2983 | |
| 159 | I | A | 0.0000 | |
| 160 | V | A | 1.4804 | |
| 161 | I | A | 1.5100 | |
| 162 | S | A | 1.1185 | |
| 163 | L | A | 0.0000 | |
| 164 | V | A | 2.0695 | |
| 165 | L | A | 2.1217 | |
| 166 | V | A | 1.6338 | |
| 167 | L | A | 1.7800 | |
| 168 | I | A | 1.9196 | |
| 169 | P | A | 0.0000 | |
| 170 | C | A | 0.0000 | |
| 171 | T | A | 1.1819 | |
| 172 | I | A | 1.5046 | |
| 173 | G | A | 0.0000 | |
| 174 | I | A | 0.0000 | |
| 175 | V | A | -0.0458 | |
| 176 | L | A | -0.7521 | |
| 177 | K | A | -1.8307 | |
| 178 | S | A | -1.7244 | |
| 179 | K | A | -2.7898 | |
| 180 | R | A | -2.9830 | |
| 181 | P | A | -2.2314 | |
| 182 | Q | A | -1.8939 | |
| 183 | Y | A | -0.3765 | |
| 184 | M | A | 0.0000 | |
| 185 | R | A | -1.4489 | |
| 186 | Y | A | 0.2514 | |
| 187 | V | A | 0.2485 | |
| 188 | I | A | 0.1951 | |
| 189 | K | A | -0.7451 | |
| 190 | G | A | 0.4053 | |
| 191 | G | A | 0.0000 | |
| 192 | M | A | 2.0735 | |
| 193 | I | A | 2.5826 | |
| 194 | I | A | 2.7749 | |
| 195 | I | A | 3.0276 | |
| 196 | L | A | 3.2102 | |
| 197 | L | A | 3.1111 | |
| 198 | C | A | 3.0287 | |
| 199 | S | A | 2.0899 | |
| 200 | V | A | 2.6041 | |
| 201 | A | A | 2.0514 | |
| 202 | V | A | 2.0283 | |
| 203 | T | A | 1.6355 | |
| 204 | V | A | 2.6607 | |
| 205 | L | A | 1.7099 | |
| 206 | S | A | 1.0273 | |
| 207 | A | A | 0.9795 | |
| 208 | I | A | 1.1668 | |
| 209 | N | A | 0.1275 | |
| 210 | V | A | 0.6422 | |
| 211 | G | A | -0.2704 | |
| 212 | K | A | -1.0425 | |
| 213 | S | A | 0.4772 | |
| 214 | I | A | 2.3327 | |
| 215 | M | A | 2.2931 | |
| 216 | F | A | 2.0325 | |
| 217 | A | A | 1.0786 | |
| 218 | M | A | 0.8000 | |
| 219 | T | A | 0.1414 | |
| 220 | P | A | 0.2951 | |
| 221 | L | A | 0.4784 | |
| 222 | L | A | 0.0000 | |
| 223 | I | A | 0.9907 | |
| 224 | A | A | 0.7328 | |
| 225 | T | A | 0.0000 | |
| 226 | S | A | 0.0000 | |
| 227 | S | A | 1.0229 | |
| 228 | L | A | 1.2498 | |
| 229 | M | A | 0.0000 | |
| 230 | P | A | 0.0000 | |
| 231 | F | A | 1.7210 | |
| 232 | I | A | 1.6043 | |
| 233 | G | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | L | A | 2.6744 | |
| 236 | L | A | 2.0294 | |
| 237 | G | A | 0.0000 | |
| 238 | Y | A | 2.1673 | |
| 239 | V | A | 2.7091 | |
| 240 | L | A | 2.3669 | |
| 241 | S | A | 0.0000 | |
| 242 | A | A | 1.9590 | |
| 243 | L | A | 2.9318 | |
| 244 | F | A | 2.4092 | |
| 245 | C | A | 1.6202 | |
| 246 | L | A | 0.1172 | |
| 247 | N | A | -1.5133 | |
| 248 | G | A | -1.7326 | |
| 249 | R | A | -2.6327 | |
| 250 | C | A | -1.5412 | |
| 251 | R | A | -0.6085 | |
| 252 | R | A | -1.3218 | |
| 253 | T | A | 0.0000 | |
| 254 | V | A | 0.0000 | |
| 255 | S | A | 0.0000 | |
| 256 | M | A | 0.0000 | |
| 257 | E | A | 0.0000 | |
| 258 | T | A | 0.0000 | |
| 259 | G | A | 0.0000 | |
| 260 | C | A | 0.0000 | |
| 261 | Q | A | 0.0000 | |
| 262 | N | A | -0.5135 | |
| 263 | V | A | -0.3839 | |
| 264 | Q | A | -1.1316 | |
| 265 | L | A | 0.0000 | |
| 266 | C | A | 0.0000 | |
| 267 | S | A | -0.2980 | |
| 268 | T | A | -0.4487 | |
| 269 | I | A | 0.0000 | |
| 270 | L | A | 0.0000 | |
| 271 | N | A | -0.3266 | |
| 272 | V | A | 0.9909 | |
| 273 | A | A | 0.0104 | |
| 274 | F | A | 0.2106 | |
| 275 | P | A | -0.4363 | |
| 276 | P | A | -0.8152 | |
| 277 | E | A | -1.6381 | |
| 278 | V | A | -0.2247 | |
| 279 | I | A | 0.0000 | |
| 280 | G | A | 0.4682 | |
| 281 | P | A | 0.4688 | |
| 282 | L | A | 0.0000 | |
| 283 | F | A | 1.9480 | |
| 284 | F | A | 1.5663 | |
| 285 | F | A | 0.0000 | |
| 286 | P | A | 0.8598 | |
| 287 | L | A | 1.6559 | |
| 288 | L | A | 1.7828 | |
| 289 | Y | A | 0.0000 | |
| 290 | M | A | 1.6704 | |
| 291 | I | A | 2.3942 | |
| 292 | F | A | 1.8048 | |
| 293 | Q | A | 0.0000 | |
| 294 | L | A | 1.5441 | |
| 295 | G | A | 1.0148 | |
| 296 | E | A | 0.9487 | |
| 297 | G | A | 0.0000 | |
| 298 | L | A | 1.7530 | |
| 299 | L | A | 1.6356 | |
| 300 | L | A | 1.4264 | |
| 301 | I | A | 0.0000 | |
| 302 | A | A | 1.3507 | |
| 303 | I | A | 1.5656 | |
| 304 | F | A | 0.7524 | |
| 305 | W | A | 0.2680 | |
| 306 | C | A | 0.6889 | |
| 307 | Y | A | 0.7103 | |
| 308 | E | A | -1.0648 | |
| 309 | K | A | -1.2710 | |
| 310 | F | A | 0.4674 | |
| 311 | K | A | -1.1028 |