| Chain sequence(s) |
A: FVNQHLCGSHLVEALYLVCGERGFFYTKPTGGGPRRGIVEQCCTSICSLYQLENYCN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:40)
[INFO] Main: Simulation completed successfully. (00:01:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 11 | F | A | 2.7978 | |
| 12 | V | A | 2.1651 | |
| 13 | N | A | 0.2361 | |
| 14 | Q | A | -0.1917 | |
| 15 | H | A | -0.6198 | |
| 16 | L | A | 0.0000 | |
| 17 | C | A | -0.4896 | |
| 18 | G | A | -0.7066 | |
| 19 | S | A | -0.7361 | |
| 20 | H | A | -1.3024 | |
| 21 | L | A | 0.0000 | |
| 22 | V | A | 0.2674 | |
| 23 | E | A | -0.9266 | |
| 24 | A | A | 0.0000 | |
| 25 | L | A | 0.0000 | |
| 26 | Y | A | 0.9239 | |
| 27 | L | A | 1.8744 | |
| 28 | V | A | 1.5568 | |
| 29 | C | A | -0.1807 | |
| 30 | G | A | -0.7359 | |
| 31 | E | A | -1.7894 | |
| 32 | R | A | -1.7043 | |
| 33 | G | A | -0.2120 | |
| 34 | F | A | 1.7364 | |
| 35 | F | A | 2.1031 | |
| 36 | Y | A | 1.2673 | |
| 37 | T | A | 0.5306 | |
| 38 | K | A | 0.0171 | |
| 39 | P | A | -0.7441 | |
| 40 | T | A | -1.2296 | |
| 41 | G | A | -1.5964 | |
| 42 | G | A | -1.7591 | |
| 43 | G | A | -1.7558 | |
| 44 | P | A | -1.6296 | |
| 45 | R | A | -2.7002 | |
| 46 | R | A | -2.6332 | |
| 47 | G | A | -1.9318 | |
| 48 | I | A | -1.4747 | |
| 49 | V | A | -1.0595 | |
| 50 | E | A | -2.1553 | |
| 51 | Q | A | -1.3614 | |
| 52 | C | A | 0.0000 | |
| 53 | C | A | -0.5160 | |
| 54 | T | A | -0.4445 | |
| 55 | S | A | -0.2705 | |
| 56 | I | A | 0.6422 | |
| 57 | C | A | 0.0000 | |
| 58 | S | A | 0.6708 | |
| 59 | L | A | 1.1834 | |
| 60 | Y | A | 0.6105 | |
| 61 | Q | A | -0.3830 | |
| 62 | L | A | 0.0000 | |
| 63 | E | A | -1.5418 | |
| 64 | N | A | -2.1070 | |
| 65 | Y | A | -1.4551 | |
| 66 | C | A | -0.9632 | |
| 67 | N | A | -2.0049 |