Project name: 2510-13.pdb

Status: done

Started: 2026-03-12 00:49:58
Settings
Chain sequence(s) H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARTGAFDYWGQGTTLTVSS
L: DIVMTQAAFSNPVTLGTSASISCRSSKSLLHSNGITYLYWYLQKPGQSPQLLIYQMSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGVYYCAQNLELPLTFGAGTRLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:17)
Show buried residues

Minimal score value
-3.3014
Maximal score value
1.1728
Average score
-0.5709
Total score value
-129.6

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9763
2 V H -0.9702
3 Q H -0.8141
4 L H 0.0000
5 V H 1.0941
6 E H 0.0000
7 S H -0.5167
8 G H -1.1986
9 G H -1.0399
11 D H -1.4422
12 L H 0.3215
13 V H -0.7051
14 K H -2.0210
15 P H -1.7752
16 G H -1.4017
17 G H -0.9578
18 S H -1.0792
19 L H -0.8236
20 K H -1.7296
21 L H 0.0000
22 S H -0.2953
23 C H 0.0000
24 A H -0.0517
25 A H 0.0000
26 S H -0.8443
27 G H -1.0867
28 F H -0.4236
29 T H -0.1881
30 F H 0.0000
35 S H -0.7996
36 S H -0.2132
37 Y H 0.1538
38 G H 0.0080
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H 0.0000
45 T H -2.0941
46 P H -2.0848
47 D H -3.1528
48 K H -3.3014
49 R H -3.2134
50 L H 0.0000
51 E H -1.0450
52 W H 0.0000
53 V H 0.0000
54 A H 0.0000
55 T H 0.4963
56 I H 0.0000
57 S H 0.1823
58 S H -0.2572
59 G H -0.6045
62 G H -0.3358
63 S H 0.1496
64 Y H 1.1728
65 T H 0.8463
66 Y H 0.6825
67 Y H -0.4866
68 P H -1.3552
69 D H -2.4907
70 S H -1.7863
71 V H 0.0000
72 K H -2.5540
74 G H -1.7334
75 R H -1.4921
76 F H 0.0000
77 T H -0.8327
78 I H 0.0000
79 S H -0.3547
80 R H -1.0896
81 D H -1.6866
82 N H -1.7865
83 A H -1.4082
84 K H -2.3482
85 N H -1.7784
86 T H -1.0105
87 L H 0.0000
88 Y H -0.4934
89 L H 0.0000
90 Q H -1.4110
91 M H 0.0000
92 S H -1.0248
93 S H -1.0757
94 L H 0.0000
95 K H -2.4333
96 S H -2.0422
97 E H -2.4135
98 D H 0.0000
99 T H -0.6953
100 A H 0.0000
101 M H -0.0916
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 T H -0.1789
108 G H -0.3518
114 A H -0.2152
115 F H 0.0000
116 D H -0.2978
117 Y H 0.1145
118 W H -0.0041
119 G H 0.0000
120 Q H -1.0900
121 G H 0.0000
122 T H 0.0000
123 T H -0.3747
124 L H 0.0000
125 T H -0.5502
126 V H 0.0000
127 S H -0.8900
128 S H -0.6770
1 D L -1.5576
2 I L 0.0000
3 V L 0.6608
4 M L 0.0000
5 T L -0.4421
6 Q L -0.1528
7 A L 0.2220
8 A L 0.7488
9 F L 1.0818
10 S L -0.2903
11 N L -1.4086
12 P L -1.2861
13 V L 0.0000
14 T L -0.7239
15 L L 0.0163
16 G L -0.6132
17 T L -0.4449
18 S L -0.8376
19 A L 0.0000
20 S L -1.0913
21 I L 0.0000
22 S L -1.0882
23 C L 0.0000
24 R L -2.2404
25 S L 0.0000
26 S L -1.0317
27 K L -1.5558
28 S L -0.8638
29 L L 0.0000
30 L L 0.4601
31 H L -0.5135
32 S L -0.9144
34 N L -1.4135
35 G L -0.6764
36 I L 0.2642
37 T L 0.0000
38 Y L 0.3242
39 L L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 L L 0.0000
44 Q L -0.9897
45 K L -1.5185
46 P L -0.9730
47 G L -1.4399
48 Q L -2.0396
49 S L -1.3088
50 P L 0.0000
51 Q L -1.0307
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.1498
56 Q L 0.2568
57 M L 0.1263
65 S L -0.2830
66 N L -0.3619
67 L L -0.0794
68 A L -0.1167
69 S L -0.4149
70 G L -0.6750
71 V L 0.0000
72 P L -1.0092
74 D L -1.9309
75 R L 0.0000
76 F L 0.0000
77 S L -1.2193
78 S L 0.0000
79 S L -0.8125
80 G L -0.7886
83 S L -0.6282
84 G L -0.5029
85 T L -1.3299
86 D L -1.8470
87 F L 0.0000
88 T L -1.1143
89 L L 0.0000
90 R L -1.8623
91 I L 0.0000
92 S L -1.3935
93 R L -1.5787
94 V L 0.0000
95 E L -1.3272
96 A L -0.9730
97 E L -1.9925
98 D L 0.0000
99 V L -0.6556
100 G L -0.9132
101 V L -0.2812
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 A L 0.0000
106 Q L 0.0000
107 N L -0.3757
108 L L -0.3162
109 E L -1.1455
114 L L -0.0076
115 P L -0.5026
116 L L 0.0000
117 T L -0.0995
118 F L 0.0000
119 G L 0.0000
120 A L -0.9127
121 G L 0.0000
122 T L 0.0000
123 R L -0.5687
124 L L 0.0000
125 E L -1.3272
126 I L -0.7651
127 K L -1.6279
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Laboratory of Theory of Biopolymers 2018