| Chain sequence(s) |
H: EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARTGAFDYWGQGTTLTVSS
L: DIVMTQAAFSNPVTLGTSASISCRSSKSLLHSNGITYLYWYLQKPGQSPQLLIYQMSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGVYYCAQNLELPLTFGAGTRLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:15)
[INFO] Main: Simulation completed successfully. (00:02:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9763 | |
| 2 | V | H | -0.9702 | |
| 3 | Q | H | -0.8141 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0941 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5167 | |
| 8 | G | H | -1.1986 | |
| 9 | G | H | -1.0399 | |
| 11 | D | H | -1.4422 | |
| 12 | L | H | 0.3215 | |
| 13 | V | H | -0.7051 | |
| 14 | K | H | -2.0210 | |
| 15 | P | H | -1.7752 | |
| 16 | G | H | -1.4017 | |
| 17 | G | H | -0.9578 | |
| 18 | S | H | -1.0792 | |
| 19 | L | H | -0.8236 | |
| 20 | K | H | -1.7296 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2953 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0517 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8443 | |
| 27 | G | H | -1.0867 | |
| 28 | F | H | -0.4236 | |
| 29 | T | H | -0.1881 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7996 | |
| 36 | S | H | -0.2132 | |
| 37 | Y | H | 0.1538 | |
| 38 | G | H | 0.0080 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -2.0941 | |
| 46 | P | H | -2.0848 | |
| 47 | D | H | -3.1528 | |
| 48 | K | H | -3.3014 | |
| 49 | R | H | -3.2134 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0450 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.4963 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.1823 | |
| 58 | S | H | -0.2572 | |
| 59 | G | H | -0.6045 | |
| 62 | G | H | -0.3358 | |
| 63 | S | H | 0.1496 | |
| 64 | Y | H | 1.1728 | |
| 65 | T | H | 0.8463 | |
| 66 | Y | H | 0.6825 | |
| 67 | Y | H | -0.4866 | |
| 68 | P | H | -1.3552 | |
| 69 | D | H | -2.4907 | |
| 70 | S | H | -1.7863 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5540 | |
| 74 | G | H | -1.7334 | |
| 75 | R | H | -1.4921 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8327 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.3547 | |
| 80 | R | H | -1.0896 | |
| 81 | D | H | -1.6866 | |
| 82 | N | H | -1.7865 | |
| 83 | A | H | -1.4082 | |
| 84 | K | H | -2.3482 | |
| 85 | N | H | -1.7784 | |
| 86 | T | H | -1.0105 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4934 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.4110 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -1.0248 | |
| 93 | S | H | -1.0757 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.4333 | |
| 96 | S | H | -2.0422 | |
| 97 | E | H | -2.4135 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6953 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.0916 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | T | H | -0.1789 | |
| 108 | G | H | -0.3518 | |
| 114 | A | H | -0.2152 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.2978 | |
| 117 | Y | H | 0.1145 | |
| 118 | W | H | -0.0041 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0900 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.3747 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | -0.5502 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8900 | |
| 128 | S | H | -0.6770 | |
| 1 | D | L | -1.5576 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6608 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.4421 | |
| 6 | Q | L | -0.1528 | |
| 7 | A | L | 0.2220 | |
| 8 | A | L | 0.7488 | |
| 9 | F | L | 1.0818 | |
| 10 | S | L | -0.2903 | |
| 11 | N | L | -1.4086 | |
| 12 | P | L | -1.2861 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -0.7239 | |
| 15 | L | L | 0.0163 | |
| 16 | G | L | -0.6132 | |
| 17 | T | L | -0.4449 | |
| 18 | S | L | -0.8376 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -1.0913 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -1.0882 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.2404 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -1.0317 | |
| 27 | K | L | -1.5558 | |
| 28 | S | L | -0.8638 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | 0.4601 | |
| 31 | H | L | -0.5135 | |
| 32 | S | L | -0.9144 | |
| 34 | N | L | -1.4135 | |
| 35 | G | L | -0.6764 | |
| 36 | I | L | 0.2642 | |
| 37 | T | L | 0.0000 | |
| 38 | Y | L | 0.3242 | |
| 39 | L | L | 0.0000 | |
| 40 | Y | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | -0.9897 | |
| 45 | K | L | -1.5185 | |
| 46 | P | L | -0.9730 | |
| 47 | G | L | -1.4399 | |
| 48 | Q | L | -2.0396 | |
| 49 | S | L | -1.3088 | |
| 50 | P | L | 0.0000 | |
| 51 | Q | L | -1.0307 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1498 | |
| 56 | Q | L | 0.2568 | |
| 57 | M | L | 0.1263 | |
| 65 | S | L | -0.2830 | |
| 66 | N | L | -0.3619 | |
| 67 | L | L | -0.0794 | |
| 68 | A | L | -0.1167 | |
| 69 | S | L | -0.4149 | |
| 70 | G | L | -0.6750 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.0092 | |
| 74 | D | L | -1.9309 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.2193 | |
| 78 | S | L | 0.0000 | |
| 79 | S | L | -0.8125 | |
| 80 | G | L | -0.7886 | |
| 83 | S | L | -0.6282 | |
| 84 | G | L | -0.5029 | |
| 85 | T | L | -1.3299 | |
| 86 | D | L | -1.8470 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -1.1143 | |
| 89 | L | L | 0.0000 | |
| 90 | R | L | -1.8623 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3935 | |
| 93 | R | L | -1.5787 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.3272 | |
| 96 | A | L | -0.9730 | |
| 97 | E | L | -1.9925 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.6556 | |
| 100 | G | L | -0.9132 | |
| 101 | V | L | -0.2812 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | A | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | N | L | -0.3757 | |
| 108 | L | L | -0.3162 | |
| 109 | E | L | -1.1455 | |
| 114 | L | L | -0.0076 | |
| 115 | P | L | -0.5026 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.0995 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.9127 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | R | L | -0.5687 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.3272 | |
| 126 | I | L | -0.7651 | |
| 127 | K | L | -1.6279 |