| Chain sequence(s) |
A: LTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:44)
[INFO] Main: Simulation completed successfully. (00:05:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 20 | L | A | 0.8404 | |
| 21 | T | A | -0.2678 | |
| 22 | S | A | -1.1800 | |
| 23 | S | A | -1.4518 | |
| 24 | E | A | -2.1505 | |
| 25 | R | A | -2.4714 | |
| 26 | I | A | 0.0000 | |
| 27 | D | A | 0.0000 | |
| 28 | K | A | -2.1227 | |
| 29 | Q | A | -1.4757 | |
| 30 | I | A | 0.0000 | |
| 31 | R | A | -2.4671 | |
| 32 | Y | A | -0.7735 | |
| 33 | I | A | 0.0000 | |
| 34 | L | A | -1.6847 | |
| 35 | D | A | -2.0124 | |
| 36 | G | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | S | A | -1.6635 | |
| 39 | A | A | -1.5842 | |
| 40 | L | A | 0.0000 | |
| 41 | R | A | -2.2317 | |
| 42 | K | A | -3.1753 | |
| 43 | E | A | -2.7768 | |
| 44 | T | A | -2.4279 | |
| 45 | C | A | 0.0000 | |
| 46 | N | A | -3.6607 | |
| 47 | K | A | -3.5302 | |
| 48 | S | A | 0.0000 | |
| 49 | N | A | -2.7595 | |
| 50 | M | A | 0.0000 | |
| 51 | C | A | 0.0000 | |
| 52 | E | A | -3.7554 | |
| 53 | S | A | -3.2606 | |
| 54 | S | A | -2.6639 | |
| 55 | K | A | -3.0942 | |
| 56 | E | A | -3.0106 | |
| 57 | A | A | -1.6432 | |
| 58 | L | A | -0.1463 | |
| 59 | A | A | -0.9475 | |
| 60 | E | A | -1.9430 | |
| 61 | N | A | -1.7857 | |
| 62 | N | A | -2.4981 | |
| 63 | L | A | 0.0000 | |
| 64 | N | A | -1.9471 | |
| 65 | L | A | -1.1111 | |
| 66 | P | A | -1.2601 | |
| 67 | K | A | -1.4290 | |
| 68 | M | A | -1.2740 | |
| 69 | A | A | -1.4936 | |
| 70 | E | A | -2.6670 | |
| 71 | K | A | -2.6695 | |
| 72 | D | A | -1.8953 | |
| 73 | G | A | 0.0000 | |
| 74 | C | A | 0.0000 | |
| 75 | F | A | -1.0334 | |
| 76 | Q | A | -1.3466 | |
| 77 | S | A | -1.4655 | |
| 78 | G | A | -1.5270 | |
| 79 | F | A | -1.3452 | |
| 80 | N | A | -1.8925 | |
| 81 | E | A | -1.8942 | |
| 82 | E | A | -2.0268 | |
| 83 | T | A | -1.2556 | |
| 84 | C | A | 0.0000 | |
| 85 | L | A | 0.0000 | |
| 86 | V | A | -0.5742 | |
| 87 | K | A | -0.6416 | |
| 88 | I | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | T | A | -0.3794 | |
| 91 | G | A | 0.0000 | |
| 92 | L | A | 0.0000 | |
| 93 | L | A | -0.7444 | |
| 94 | E | A | -1.1218 | |
| 95 | F | A | 0.0000 | |
| 96 | E | A | -1.2294 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.0000 | |
| 99 | L | A | 0.0000 | |
| 100 | E | A | -2.1955 | |
| 101 | Y | A | 0.0000 | |
| 102 | L | A | 0.0000 | |
| 103 | Q | A | -2.8780 | |
| 104 | N | A | -3.3136 | |
| 105 | R | A | -2.6449 | |
| 106 | F | A | 0.0000 | |
| 107 | E | A | -3.1614 | |
| 108 | S | A | -1.9402 | |
| 109 | S | A | -2.3558 | |
| 110 | E | A | -3.4625 | |
| 111 | E | A | -3.4633 | |
| 112 | Q | A | -2.6526 | |
| 113 | A | A | 0.0000 | |
| 114 | R | A | -2.8866 | |
| 115 | A | A | -1.4265 | |
| 116 | V | A | 0.0000 | |
| 117 | Q | A | -0.9299 | |
| 118 | M | A | 0.2027 | |
| 119 | S | A | 0.0000 | |
| 120 | T | A | 0.0000 | |
| 121 | K | A | -0.4998 | |
| 122 | V | A | 0.1052 | |
| 123 | L | A | 0.0000 | |
| 124 | I | A | 0.0000 | |
| 125 | Q | A | -1.8334 | |
| 126 | F | A | -1.3808 | |
| 127 | L | A | 0.0000 | |
| 128 | Q | A | -2.6115 | |
| 129 | K | A | -3.0015 | |
| 130 | K | A | -2.8014 | |
| 131 | A | A | -2.8412 | |
| 132 | K | A | -3.2659 | |
| 133 | N | A | -2.6343 | |
| 134 | L | A | -2.3406 | |
| 135 | D | A | -2.3681 | |
| 136 | A | A | -1.8232 | |
| 137 | I | A | 0.0000 | |
| 138 | T | A | -0.6715 | |
| 139 | T | A | -0.6289 | |
| 140 | P | A | -1.0784 | |
| 141 | D | A | -1.9349 | |
| 142 | P | A | -1.1564 | |
| 143 | T | A | -0.7724 | |
| 144 | T | A | -0.6963 | |
| 145 | N | A | 0.0000 | |
| 146 | A | A | -0.5522 | |
| 147 | S | A | -0.6741 | |
| 148 | L | A | -0.8465 | |
| 149 | L | A | -0.8441 | |
| 150 | T | A | -1.1542 | |
| 151 | K | A | -2.1572 | |
| 152 | L | A | 0.0000 | |
| 153 | Q | A | -2.0059 | |
| 154 | A | A | -1.6326 | |
| 155 | Q | A | -1.6900 | |
| 156 | N | A | -1.7944 | |
| 157 | Q | A | -1.6316 | |
| 158 | W | A | -0.2944 | |
| 159 | L | A | -0.3994 | |
| 160 | Q | A | -1.1911 | |
| 161 | D | A | -0.9349 | |
| 162 | M | A | 0.0000 | |
| 163 | T | A | 0.0000 | |
| 164 | T | A | 0.0000 | |
| 165 | H | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | I | A | 0.0000 | |
| 168 | L | A | 0.0000 | |
| 169 | R | A | -2.2379 | |
| 170 | S | A | -1.7764 | |
| 171 | F | A | 0.0000 | |
| 172 | K | A | -2.8248 | |
| 173 | E | A | -2.7848 | |
| 174 | F | A | 0.0000 | |
| 175 | L | A | 0.0000 | |
| 176 | Q | A | -2.3153 | |
| 177 | S | A | -1.5596 | |
| 178 | S | A | 0.0000 | |
| 179 | L | A | 0.0000 | |
| 180 | R | A | -2.7592 | |
| 181 | A | A | 0.0000 | |
| 182 | L | A | 0.0000 | |
| 183 | R | A | -3.0976 | |
| 184 | Q | A | -2.5419 | |
| 185 | M | A | -1.4019 |