Project name: query_structure

Status: done

Started: 2026-03-16 23:48:56
Settings
Chain sequence(s) A: INMPNMVGNMIMMVINMPNMVGNMIMMVINMPNMVGNMIMMVINMPNMVGNMIMMV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-0.6395
Maximal score value
3.7012
Average score
1.6199
Total score value
90.7119

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 1.4443
2 N A 0.0336
3 M A 1.0234
4 P A 0.2290
5 N A -0.5252
6 M A 0.7618
7 V A 1.1148
8 G A 0.3678
9 N A 0.4713
10 M A 2.0021
11 I A 3.1138
12 M A 2.8260
13 M A 2.9158
14 V A 3.5061
15 I A 2.9738
16 N A 1.0943
17 M A 1.7871
18 P A 0.3906
19 N A -0.6395
20 M A 0.6014
21 V A 1.0265
22 G A 0.2730
23 N A 0.4560
24 M A 1.9942
25 I A 3.0965
26 M A 2.8944
27 M A 3.0275
28 V A 3.6116
29 I A 3.2144
30 N A 1.2429
31 M A 1.9120
32 P A 0.4702
33 N A -0.5197
34 M A 0.7026
35 V A 0.9830
36 G A 0.4742
37 N A 0.4247
38 M A 1.9023
39 I A 2.9605
40 M A 2.8623
41 M A 2.9199
42 V A 3.4947
43 I A 3.1986
44 N A 1.3798
45 M A 1.5372
46 P A 0.3612
47 N A -0.4250
48 M A 0.6894
49 V A 1.2326
50 G A 0.7500
51 N A 1.0255
52 M A 2.7178
53 I A 3.7012
54 M A 3.1861
55 M A 3.1147
56 V A 3.3268
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Laboratory of Theory of Biopolymers 2018