| Chain sequence(s) |
A: NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNVVFGGGTKLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:25)
[INFO] Main: Simulation completed successfully. (00:01:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.1327 | |
| 2 | F | A | 0.0000 | |
| 3 | M | A | 0.8075 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | -0.0050 | |
| 6 | Q | A | -0.5190 | |
| 7 | P | A | -0.9467 | |
| 8 | H | A | -1.5263 | |
| 9 | S | A | -1.1080 | |
| 10 | V | A | -0.5496 | |
| 11 | S | A | -0.2690 | |
| 12 | E | A | -0.7713 | |
| 13 | S | A | -0.5639 | |
| 14 | P | A | -1.1726 | |
| 15 | G | A | -1.6828 | |
| 16 | K | A | -2.0590 | |
| 17 | T | A | -1.2498 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.1815 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.2786 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.2627 | |
| 24 | R | A | 0.0000 | |
| 25 | S | A | -0.3098 | |
| 26 | S | A | -0.6300 | |
| 27 | G | A | -0.8832 | |
| 28 | S | A | -0.8767 | |
| 29 | I | A | 0.0000 | |
| 30 | A | A | -0.3414 | |
| 31 | S | A | -0.3276 | |
| 32 | N | A | -0.2864 | |
| 33 | Y | A | 0.1961 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -0.2885 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.1869 | |
| 38 | Q | A | 0.0000 | |
| 39 | Q | A | -1.4875 | |
| 40 | R | A | -2.2379 | |
| 41 | P | A | -1.3986 | |
| 42 | G | A | -1.0746 | |
| 43 | S | A | -1.0473 | |
| 44 | S | A | -0.8100 | |
| 45 | P | A | -0.7453 | |
| 46 | T | A | -0.3460 | |
| 47 | T | A | -0.0510 | |
| 48 | V | A | 0.0000 | |
| 49 | I | A | 0.0000 | |
| 50 | Y | A | -0.8639 | |
| 51 | E | A | -1.4589 | |
| 52 | D | A | -1.3613 | |
| 53 | N | A | -2.0789 | |
| 54 | Q | A | -2.0030 | |
| 55 | R | A | -1.8809 | |
| 56 | P | A | -0.6785 | |
| 57 | S | A | -0.6676 | |
| 58 | G | A | -0.8291 | |
| 59 | V | A | -0.8513 | |
| 60 | P | A | -1.2671 | |
| 61 | D | A | -2.1720 | |
| 62 | R | A | -1.4250 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | -1.2458 | |
| 65 | G | A | -1.1033 | |
| 66 | S | A | -0.9763 | |
| 67 | I | A | -0.4966 | |
| 68 | D | A | -1.3337 | |
| 69 | S | A | -0.9860 | |
| 70 | S | A | -0.7968 | |
| 71 | S | A | -0.7762 | |
| 72 | N | A | -0.9023 | |
| 73 | S | A | -0.6939 | |
| 74 | A | A | 0.0000 | |
| 75 | S | A | -0.5196 | |
| 76 | L | A | 0.0000 | |
| 77 | T | A | -0.2646 | |
| 78 | I | A | 0.0000 | |
| 79 | S | A | -1.2691 | |
| 80 | G | A | -1.5193 | |
| 81 | L | A | 0.0000 | |
| 82 | K | A | -2.1293 | |
| 83 | T | A | -1.3129 | |
| 84 | E | A | -2.0061 | |
| 85 | D | A | 0.0000 | |
| 86 | E | A | -2.0658 | |
| 87 | A | A | 0.0000 | |
| 88 | D | A | -1.5368 | |
| 89 | Y | A | 0.0000 | |
| 90 | Y | A | 0.0935 | |
| 91 | C | A | 0.0000 | |
| 92 | Q | A | 1.2135 | |
| 93 | S | A | 0.0000 | |
| 94 | Y | A | 0.7821 | |
| 95 | D | A | -0.5629 | |
| 96 | S | A | -0.4664 | |
| 97 | S | A | -0.5526 | |
| 98 | N | A | -0.0206 | |
| 99 | V | A | 1.6393 | |
| 100 | V | A | 1.5565 | |
| 101 | F | A | 1.8597 | |
| 102 | G | A | 0.6032 | |
| 103 | G | A | -0.3925 | |
| 104 | G | A | -0.6704 | |
| 105 | T | A | 0.0000 | |
| 106 | K | A | -1.9072 | |
| 107 | L | A | 0.0000 | |
| 108 | T | A | -0.6239 | |
| 109 | V | A | -0.4027 | |
| 110 | L | A | 1.1220 |