| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHEGADVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRSGPEGHPLPDDPPPSPLYVRPPPDSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPPNNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9429 | |
| 2 | L | A | 1.9655 | |
| 3 | P | A | 0.6576 | |
| 4 | P | A | 0.3779 | |
| 5 | T | A | 0.1202 | |
| 6 | T | A | 0.1344 | |
| 7 | P | A | 0.1722 | |
| 8 | V | A | 1.2364 | |
| 9 | A | A | 0.0884 | |
| 10 | K | A | -1.0105 | |
| 11 | V | A | -0.1459 | |
| 12 | Q | A | -1.3841 | |
| 13 | S | A | -1.5381 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4002 | |
| 16 | E | A | -2.4287 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4661 | |
| 20 | P | A | 0.1306 | |
| 21 | T | A | 0.1778 | |
| 22 | S | A | -0.0988 | |
| 23 | L | A | 0.0830 | |
| 24 | F | A | -0.0438 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2913 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9042 | |
| 31 | R | A | -2.6901 | |
| 32 | L | A | -0.8003 | |
| 33 | L | A | 1.1590 | |
| 34 | T | A | 1.3677 | |
| 35 | V | A | 1.8242 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2561 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6375 | |
| 40 | K | A | -1.6886 | |
| 41 | D | A | -0.7330 | |
| 42 | I | A | 1.2658 | |
| 43 | V | A | 2.1261 | |
| 44 | V | A | 1.4869 | |
| 45 | D | A | -1.0151 | |
| 46 | G | A | -0.5945 | |
| 47 | K | A | -0.2824 | |
| 48 | V | A | 1.9237 | |
| 49 | L | A | 2.4619 | |
| 50 | V | A | 1.4333 | |
| 51 | P | A | 0.3137 | |
| 52 | K | A | -0.6988 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1568 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3982 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2361 | |
| 70 | K | A | -1.7863 | |
| 71 | F | A | -0.6310 | |
| 72 | A | A | -0.5676 | |
| 73 | L | A | -0.8560 | |
| 74 | P | A | -1.1991 | |
| 75 | Q | A | -2.5072 | |
| 76 | K | A | -3.1093 | |
| 77 | D | A | -2.9936 | |
| 78 | F | A | -1.6741 | |
| 79 | Y | A | -1.8980 | |
| 80 | D | A | -2.6991 | |
| 81 | P | A | -2.3084 | |
| 82 | E | A | -3.0519 | |
| 83 | K | A | -3.3892 | |
| 84 | E | A | -2.4576 | |
| 85 | R | A | -1.2977 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6664 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9637 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3639 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6997 | |
| 99 | G | A | -0.5380 | |
| 100 | P | A | -0.4166 | |
| 101 | L | A | 0.0161 | |
| 102 | G | A | -0.2539 | |
| 103 | K | A | -0.7049 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4394 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0870 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1401 | |
| 110 | L | A | 0.0140 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1146 | |
| 113 | K | A | -0.5624 | |
| 114 | L | A | -1.1381 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.0581 | |
| 117 | T | A | -0.8021 | |
| 118 | E | A | -1.6774 | |
| 119 | N | A | -1.9105 | |
| 120 | P | A | -1.3839 | |
| 121 | T | A | -0.7370 | |
| 122 | A | A | -0.5705 | |
| 123 | P | A | -0.3562 | |
| 124 | Q | A | -1.3625 | |
| 125 | H | A | -1.8551 | |
| 126 | E | A | -2.6659 | |
| 127 | G | A | -2.1389 | |
| 128 | A | A | -1.4330 | |
| 129 | D | A | -2.1478 | |
| 130 | V | A | -1.4137 | |
| 131 | R | A | -1.0462 | |
| 132 | V | A | -0.2617 | |
| 133 | N | A | -0.8822 | |
| 134 | F | A | -0.3612 | |
| 135 | S | A | -0.3470 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4625 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2689 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5629 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1815 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1774 | |
| 157 | D | A | 0.3494 | |
| 158 | L | A | 0.8052 | |
| 159 | A | A | 0.1823 | |
| 160 | E | A | -1.4498 | |
| 161 | P | A | -0.2058 | |
| 162 | C | A | 0.1871 | |
| 163 | P | A | -0.1692 | |
| 164 | G | A | -0.0769 | |
| 165 | L | A | 0.5884 | |
| 166 | P | A | -0.1174 | |
| 167 | P | A | -0.3409 | |
| 168 | G | A | -0.4496 | |
| 169 | A | A | -0.0269 | |
| 170 | C | A | 0.6636 | |
| 171 | P | A | 0.5373 | |
| 172 | P | A | 0.8673 | |
| 173 | I | A | 2.0470 | |
| 174 | Q | A | 0.8836 | |
| 175 | L | A | 1.5097 | |
| 176 | V | A | 0.8676 | |
| 177 | N | A | -0.2901 | |
| 178 | S | A | 0.0309 | |
| 179 | V | A | 0.4290 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3821 | |
| 182 | D | A | 0.0780 | |
| 183 | G | A | -0.1592 | |
| 184 | D | A | -0.5160 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0954 | |
| 190 | F | A | 0.0577 | |
| 191 | G | A | -0.1072 | |
| 192 | N | A | -0.2406 | |
| 193 | M | A | -0.0816 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3774 | |
| 197 | E | A | -2.5903 | |
| 198 | L | A | -1.2088 | |
| 199 | Q | A | -2.5513 | |
| 200 | Q | A | -3.3123 | |
| 201 | D | A | -3.5669 | |
| 202 | R | A | -3.3180 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2275 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3332 | |
| 211 | S | A | -1.8532 | |
| 212 | T | A | -1.3815 | |
| 213 | R | A | -1.9926 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1501 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3496 | |
| 220 | L | A | 0.6148 | |
| 221 | K | A | -1.0929 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8142 | |
| 224 | N | A | -1.4927 | |
| 225 | E | A | -1.2429 | |
| 226 | A | A | -0.6035 | |
| 227 | Y | A | -0.3698 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6556 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0783 | |
| 234 | F | A | 0.2610 | |
| 235 | G | A | -0.8249 | |
| 236 | R | A | -2.6211 | |
| 237 | R | A | -2.9271 | |
| 238 | E | A | -2.1792 | |
| 239 | Q | A | -0.2456 | |
| 240 | V | A | 1.3820 | |
| 241 | Y | A | 1.1135 | |
| 242 | A | A | 0.2589 | |
| 243 | R | A | -0.8448 | |
| 244 | H | A | -0.8691 | |
| 245 | F | A | 0.1476 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5522 | |
| 249 | S | A | -1.3471 | |
| 250 | G | A | -1.1525 | |
| 251 | P | A | -1.1996 | |
| 252 | E | A | -1.4346 | |
| 253 | G | A | -1.2683 | |
| 254 | H | A | -1.4475 | |
| 255 | P | A | -1.3498 | |
| 256 | L | A | -0.4454 | |
| 257 | P | A | -0.9589 | |
| 258 | D | A | -1.9703 | |
| 259 | D | A | -1.4427 | |
| 260 | P | A | -1.1796 | |
| 261 | P | A | -0.6391 | |
| 262 | P | A | -0.2196 | |
| 263 | S | A | -0.1719 | |
| 264 | P | A | 0.5700 | |
| 265 | L | A | 1.4583 | |
| 266 | Y | A | 1.1320 | |
| 267 | V | A | 1.0842 | |
| 268 | R | A | -0.6221 | |
| 269 | P | A | -0.2641 | |
| 270 | P | A | -0.8911 | |
| 271 | P | A | -1.0373 | |
| 272 | D | A | -1.6638 | |
| 273 | S | A | -0.5916 | |
| 274 | P | A | -0.0218 | |
| 275 | Y | A | 0.8364 | |
| 276 | A | A | 0.3966 | |
| 277 | V | A | 1.1526 | |
| 278 | R | A | 0.0537 | |
| 279 | P | A | -0.5881 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5546 | |
| 282 | D | A | -0.9476 | |
| 283 | Y | A | 0.8762 | |
| 284 | F | A | 0.6898 | |
| 285 | G | A | 0.2734 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9053 | |
| 291 | L | A | 1.5877 | |
| 292 | V | A | 0.5962 | |
| 293 | S | A | -0.1594 | |
| 294 | S | A | -0.9660 | |
| 295 | D | A | -1.8438 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1124 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6303 | |
| 301 | R | A | -1.8292 | |
| 302 | P | A | -0.9385 | |
| 303 | F | A | -0.1873 | |
| 304 | W | A | -0.5609 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0859 | |
| 307 | R | A | -2.8346 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2687 | |
| 310 | G | A | -1.2308 | |
| 311 | N | A | -1.2677 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8295 | |
| 319 | N | A | -0.9379 | |
| 320 | E | A | -1.0410 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3596 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0878 | |
| 333 | N | A | 0.5703 | |
| 334 | F | A | 1.7726 | |
| 335 | T | A | 0.8788 | |
| 336 | I | A | 0.4399 | |
| 337 | S | A | -0.9714 | |
| 338 | Q | A | -1.7640 | |
| 339 | Q | A | -1.3814 | |
| 340 | L | A | 0.6372 | |
| 341 | C | A | 0.4509 | |
| 342 | T | A | 0.0847 | |
| 343 | P | A | -0.0722 | |
| 344 | P | A | -0.6425 | |
| 345 | N | A | -1.2672 | |
| 346 | N | A | -0.8825 | |
| 347 | V | A | 1.0825 | |
| 348 | Y | A | 1.2738 | |
| 349 | D | A | 0.0352 | |
| 350 | P | A | -0.3493 | |
| 351 | S | A | -0.2833 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8009 | |
| 354 | K | A | -1.7998 | |
| 355 | N | A | -1.7779 | |
| 356 | Y | A | -0.0937 | |
| 357 | L | A | 0.6474 | |
| 358 | R | A | 0.9725 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3871 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0847 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0721 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6966 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2761 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3035 | |
| 376 | L | A | -1.6904 | |
| 377 | D | A | -1.9455 | |
| 378 | P | A | -1.0169 | |
| 379 | G | A | -1.0007 | |
| 380 | V | A | -0.9203 | |
| 381 | L | A | -0.5194 | |
| 382 | A | A | -0.6483 | |
| 383 | H | A | -0.7970 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4077 | |
| 386 | T | A | -0.5491 | |
| 387 | M | A | -0.2988 | |
| 388 | N | A | -0.8658 | |
| 389 | P | A | -1.2445 | |
| 390 | T | A | -1.4431 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4352 | |
| 393 | E | A | -2.7646 | |
| 394 | N | A | -2.2102 | |
| 395 | W | A | -1.3623 | |
| 396 | N | A | -1.0829 | |
| 397 | L | A | -0.1751 | |
| 398 | G | A | 0.5231 | |
| 399 | F | A | 2.4231 | |
| 400 | V | A | 1.8465 | |
| 401 | P | A | 0.0538 | |
| 402 | P | A | -1.8571 | |
| 403 | K | A | -3.2352 | |
| 404 | E | A | -3.7840 | |
| 405 | R | A | -3.9267 | |
| 406 | E | A | -3.7991 | |
| 407 | D | A | -2.8782 | |
| 408 | P | A | -1.7699 | |
| 409 | Y | A | -0.9899 | |
| 410 | K | A | -2.1192 | |
| 411 | G | A | -0.6394 | |
| 412 | L | A | 0.6730 | |
| 413 | I | A | 1.5836 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3987 | |
| 416 | E | A | -1.7015 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9528 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0494 | |
| 421 | E | A | -2.7769 | |
| 422 | R | A | -2.6229 | |
| 423 | F | A | -1.2801 | |
| 424 | S | A | -1.4765 | |
| 425 | Q | A | -1.8784 | |
| 426 | D | A | -2.9129 | |
| 427 | L | A | -2.0018 | |
| 428 | D | A | -2.7891 | |
| 429 | Q | A | -2.6233 | |
| 430 | F | A | -1.4268 | |
| 431 | A | A | -0.8999 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5823 | |
| 435 | K | A | -0.7114 | |
| 436 | F | A | 0.1364 | |
| 437 | L | A | 1.0237 | |
| 438 | Y | A | 0.8248 | |
| 439 | Q | A | -0.2722 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine