| Chain sequence(s) |
A: SKDDLIDLSRYGAKINIGDRVYYDSIDKKNQIKLINLEESSTIEVILKNAIVYNSMYENFSTSFWIKIPKYFSKINLNNEYTIINCIENNSGWKVSLNYGEIIWTLQDNKQNIQRVVFKYSQMVNISDYINRWIFVTITNNRLTKSKIYINGRLIDQKPISNLGNIHASNKIMFKLDGCRDPRRYIMIKYFNLFDKELNEKEIKDLYDSQSNSGILKDFWGNYLQYDKPYYMLNLFDPNKYVDVNNIGIRGYMYLKGPRGSVVTTNIYLNSTLYEGTKFIIKKYASGNEDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVGNLSQVVVMKSKDDQGIRNKCKMNLQDNNGNDIGFIGFHLLYDNIAKLVASNWYNRQVGKASRTFGCSWEFIPVDDDGWGESS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:21)
[INFO] Main: Simulation completed successfully. (00:05:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 883 | S | A | -1.7176 | |
| 884 | K | A | -2.9647 | |
| 885 | D | A | -3.2907 | |
| 886 | D | A | -2.1339 | |
| 887 | L | A | -0.3337 | |
| 888 | I | A | 1.3789 | |
| 889 | D | A | 0.5358 | |
| 890 | L | A | 1.1774 | |
| 891 | S | A | -0.2228 | |
| 892 | R | A | -1.6146 | |
| 893 | Y | A | -1.3441 | |
| 894 | G | A | -0.9720 | |
| 895 | A | A | -1.0312 | |
| 896 | K | A | -1.5316 | |
| 897 | I | A | -0.3068 | |
| 898 | N | A | -0.3032 | |
| 899 | I | A | -0.4892 | |
| 900 | G | A | -1.3433 | |
| 901 | D | A | -2.2579 | |
| 902 | R | A | -1.7454 | |
| 903 | V | A | -0.4458 | |
| 904 | Y | A | -0.5043 | |
| 905 | Y | A | -0.8778 | |
| 906 | D | A | -0.9398 | |
| 907 | S | A | -0.5509 | |
| 908 | I | A | -0.1988 | |
| 909 | D | A | 0.0000 | |
| 910 | K | A | -2.5921 | |
| 911 | N | A | -1.4717 | |
| 912 | Q | A | 0.0000 | |
| 913 | I | A | -0.2377 | |
| 914 | K | A | -0.3065 | |
| 915 | L | A | 0.0000 | |
| 916 | I | A | -0.5317 | |
| 917 | N | A | -1.4311 | |
| 918 | L | A | -1.1729 | |
| 919 | E | A | -2.2227 | |
| 920 | S | A | -1.6274 | |
| 921 | S | A | 0.0000 | |
| 922 | T | A | -1.0347 | |
| 923 | I | A | 0.0000 | |
| 924 | E | A | -0.4685 | |
| 925 | V | A | -0.3971 | |
| 926 | I | A | -1.1122 | |
| 927 | L | A | 0.0000 | |
| 928 | K | A | -2.4388 | |
| 929 | N | A | -1.9834 | |
| 930 | A | A | -0.9414 | |
| 931 | I | A | -0.7066 | |
| 932 | V | A | -0.9656 | |
| 933 | Y | A | -1.1567 | |
| 934 | N | A | -1.5707 | |
| 935 | S | A | 0.0000 | |
| 936 | M | A | 0.8468 | |
| 937 | Y | A | 0.9208 | |
| 938 | E | A | -1.7108 | |
| 939 | N | A | -1.6777 | |
| 940 | F | A | 0.0000 | |
| 941 | S | A | 0.0000 | |
| 942 | T | A | 0.0000 | |
| 943 | S | A | 0.0000 | |
| 944 | F | A | 0.0000 | |
| 945 | W | A | 0.0000 | |
| 946 | I | A | 0.0000 | |
| 947 | K | A | 0.0000 | |
| 948 | I | A | 0.0000 | |
| 949 | P | A | 0.0000 | |
| 950 | K | A | 0.0000 | |
| 951 | Y | A | 0.0000 | |
| 952 | F | A | 0.7025 | |
| 953 | S | A | -0.3382 | |
| 954 | K | A | -1.3323 | |
| 955 | I | A | -0.1574 | |
| 956 | N | A | 0.0000 | |
| 957 | L | A | -0.8237 | |
| 958 | N | A | -1.4650 | |
| 959 | N | A | -1.4298 | |
| 960 | E | A | -1.5669 | |
| 961 | Y | A | 0.0000 | |
| 962 | T | A | 0.0000 | |
| 963 | I | A | 0.0000 | |
| 964 | I | A | 0.0000 | |
| 965 | N | A | -0.8401 | |
| 966 | C | A | 0.0000 | |
| 967 | I | A | -1.3042 | |
| 968 | E | A | -2.4987 | |
| 969 | N | A | -2.6453 | |
| 970 | N | A | -2.8757 | |
| 971 | S | A | 0.0000 | |
| 972 | G | A | 0.0000 | |
| 973 | W | A | 0.0000 | |
| 974 | K | A | -0.3545 | |
| 975 | V | A | 0.0000 | |
| 976 | S | A | 0.0000 | |
| 977 | L | A | 0.0000 | |
| 978 | N | A | -0.9022 | |
| 979 | Y | A | -0.5310 | |
| 980 | G | A | 0.0000 | |
| 981 | E | A | -0.9366 | |
| 982 | I | A | 0.0000 | |
| 983 | I | A | 0.0000 | |
| 984 | W | A | 0.0000 | |
| 985 | T | A | 0.0000 | |
| 986 | L | A | 0.0000 | |
| 987 | Q | A | 0.0000 | |
| 988 | D | A | 0.0000 | |
| 989 | N | A | -2.4162 | |
| 990 | K | A | -2.5058 | |
| 991 | Q | A | -2.0309 | |
| 992 | N | A | -1.1276 | |
| 993 | I | A | 0.4916 | |
| 994 | Q | A | -0.3579 | |
| 995 | R | A | -0.6012 | |
| 996 | V | A | 0.0000 | |
| 997 | V | A | -0.4825 | |
| 998 | F | A | 0.0000 | |
| 999 | K | A | -1.6264 | |
| 1000 | Y | A | 0.0000 | |
| 1001 | S | A | -0.2032 | |
| 1002 | Q | A | 0.0000 | |
| 1003 | M | A | 1.0243 | |
| 1004 | V | A | 0.4809 | |
| 1005 | N | A | -0.7782 | |
| 1006 | I | A | -0.2624 | |
| 1007 | S | A | 0.0000 | |
| 1008 | D | A | -1.6250 | |
| 1009 | Y | A | -0.7350 | |
| 1010 | I | A | 0.0000 | |
| 1011 | N | A | 0.0000 | |
| 1012 | R | A | -0.4895 | |
| 1013 | W | A | -0.2438 | |
| 1014 | I | A | 0.0000 | |
| 1015 | F | A | 0.0000 | |
| 1016 | V | A | 0.0000 | |
| 1017 | T | A | 0.0000 | |
| 1018 | I | A | 0.0000 | |
| 1019 | T | A | 0.0000 | |
| 1020 | N | A | 0.0000 | |
| 1021 | N | A | -0.5510 | |
| 1022 | R | A | 0.0000 | |
| 1023 | L | A | 1.2473 | |
| 1024 | T | A | -0.0855 | |
| 1025 | K | A | -0.9529 | |
| 1026 | S | A | 0.0000 | |
| 1027 | K | A | -0.6819 | |
| 1028 | I | A | 0.0000 | |
| 1029 | Y | A | 0.0000 | |
| 1030 | I | A | 0.0000 | |
| 1031 | N | A | -0.7459 | |
| 1032 | G | A | -1.8953 | |
| 1033 | R | A | -1.7270 | |
| 1034 | L | A | -0.0633 | |
| 1035 | I | A | 0.3432 | |
| 1036 | D | A | -0.5837 | |
| 1037 | Q | A | -1.0118 | |
| 1038 | K | A | -1.5509 | |
| 1039 | P | A | -1.1657 | |
| 1040 | I | A | 0.0000 | |
| 1041 | S | A | -0.4329 | |
| 1042 | N | A | -1.1765 | |
| 1043 | L | A | 0.0000 | |
| 1044 | G | A | -0.6195 | |
| 1045 | N | A | -0.5478 | |
| 1046 | I | A | 0.0000 | |
| 1047 | H | A | -1.8161 | |
| 1048 | A | A | 0.0000 | |
| 1049 | S | A | 0.0000 | |
| 1050 | N | A | -1.6388 | |
| 1051 | K | A | -1.3669 | |
| 1052 | I | A | 0.0000 | |
| 1053 | M | A | -0.3649 | |
| 1054 | F | A | 0.0000 | |
| 1055 | K | A | -1.0310 | |
| 1056 | L | A | 0.0000 | |
| 1057 | D | A | -2.2389 | |
| 1058 | G | A | -1.6669 | |
| 1059 | C | A | -1.7411 | |
| 1060 | R | A | -2.2726 | |
| 1061 | D | A | 0.0000 | |
| 1062 | P | A | -1.4392 | |
| 1063 | R | A | -2.1447 | |
| 1064 | R | A | 0.0000 | |
| 1065 | Y | A | 0.0000 | |
| 1066 | I | A | 0.0000 | |
| 1067 | M | A | 0.0114 | |
| 1068 | I | A | 0.0000 | |
| 1069 | K | A | 0.0000 | |
| 1070 | Y | A | 0.6199 | |
| 1071 | F | A | 0.4657 | |
| 1072 | N | A | 0.2489 | |
| 1073 | L | A | 0.1343 | |
| 1074 | F | A | -0.8331 | |
| 1075 | D | A | -2.4892 | |
| 1076 | K | A | -2.8017 | |
| 1077 | E | A | -2.3300 | |
| 1078 | L | A | 0.0000 | |
| 1079 | N | A | -2.8699 | |
| 1080 | E | A | -3.8448 | |
| 1081 | K | A | -3.7017 | |
| 1082 | E | A | -2.8079 | |
| 1083 | I | A | 0.0000 | |
| 1084 | K | A | -3.2954 | |
| 1085 | D | A | -2.5093 | |
| 1086 | L | A | -1.3743 | |
| 1087 | Y | A | -1.3626 | |
| 1088 | D | A | -1.1412 | |
| 1089 | S | A | -1.0266 | |
| 1090 | Q | A | -0.6550 | |
| 1091 | S | A | -0.7898 | |
| 1092 | N | A | -0.9366 | |
| 1093 | S | A | -0.8182 | |
| 1094 | G | A | -0.7946 | |
| 1095 | I | A | -0.6132 | |
| 1096 | L | A | 0.0000 | |
| 1097 | K | A | -0.8484 | |
| 1098 | D | A | 0.0000 | |
| 1099 | F | A | 0.0000 | |
| 1100 | W | A | 0.0000 | |
| 1101 | G | A | -0.3541 | |
| 1102 | N | A | -0.2111 | |
| 1103 | Y | A | -0.0851 | |
| 1104 | L | A | 0.0000 | |
| 1105 | Q | A | 0.0000 | |
| 1106 | Y | A | 0.0000 | |
| 1107 | D | A | -2.4599 | |
| 1108 | K | A | -1.7341 | |
| 1109 | P | A | -0.7093 | |
| 1110 | Y | A | 0.0000 | |
| 1111 | Y | A | 0.0000 | |
| 1112 | M | A | 0.0000 | |
| 1113 | L | A | 0.0000 | |
| 1114 | N | A | 0.0000 | |
| 1115 | L | A | 1.0123 | |
| 1116 | F | A | 2.1771 | |
| 1117 | D | A | 0.4230 | |
| 1118 | P | A | -0.5175 | |
| 1119 | N | A | -1.7576 | |
| 1120 | K | A | -1.5066 | |
| 1121 | Y | A | -1.0507 | |
| 1122 | V | A | 0.0000 | |
| 1123 | D | A | -0.9600 | |
| 1124 | V | A | 0.0000 | |
| 1125 | N | A | -1.2804 | |
| 1126 | N | A | -0.8657 | |
| 1127 | I | A | -0.0165 | |
| 1128 | G | A | -0.0959 | |
| 1129 | I | A | 0.6902 | |
| 1130 | R | A | -0.9852 | |
| 1131 | G | A | 0.0000 | |
| 1132 | Y | A | -0.0966 | |
| 1133 | M | A | 0.0000 | |
| 1134 | Y | A | -0.1075 | |
| 1135 | L | A | 0.0000 | |
| 1136 | K | A | -1.3242 | |
| 1137 | G | A | -1.4613 | |
| 1138 | P | A | -1.2346 | |
| 1139 | R | A | 0.0000 | |
| 1140 | G | A | -0.8443 | |
| 1141 | S | A | 0.1744 | |
| 1142 | V | A | 0.9867 | |
| 1143 | V | A | 2.1951 | |
| 1144 | T | A | 0.7938 | |
| 1145 | T | A | -0.0999 | |
| 1146 | N | A | -0.9486 | |
| 1147 | I | A | 0.0000 | |
| 1148 | Y | A | 1.0845 | |
| 1149 | L | A | 1.6380 | |
| 1150 | N | A | 0.0000 | |
| 1151 | S | A | 0.0000 | |
| 1152 | T | A | -0.2265 | |
| 1153 | L | A | 0.0000 | |
| 1154 | Y | A | 0.0000 | |
| 1155 | E | A | -0.7202 | |
| 1156 | G | A | -0.6616 | |
| 1157 | T | A | 0.0000 | |
| 1158 | K | A | -0.9967 | |
| 1159 | F | A | 0.0000 | |
| 1160 | I | A | 0.0000 | |
| 1161 | I | A | 0.0000 | |
| 1162 | K | A | -1.2564 | |
| 1163 | K | A | -1.1987 | |
| 1164 | Y | A | 0.4261 | |
| 1165 | A | A | -0.0925 | |
| 1166 | S | A | -1.1236 | |
| 1167 | G | A | -1.2440 | |
| 1168 | N | A | -2.1279 | |
| 1169 | E | A | -2.7718 | |
| 1170 | D | A | -2.0209 | |
| 1171 | N | A | -1.8053 | |
| 1172 | I | A | -0.8551 | |
| 1173 | V | A | 0.0000 | |
| 1174 | R | A | -1.1827 | |
| 1175 | N | A | -1.4948 | |
| 1176 | N | A | -1.9056 | |
| 1177 | D | A | 0.0000 | |
| 1178 | R | A | -1.2135 | |
| 1179 | V | A | 0.0000 | |
| 1180 | Y | A | -0.0428 | |
| 1181 | I | A | 0.0000 | |
| 1182 | N | A | 0.0000 | |
| 1183 | V | A | 0.0000 | |
| 1184 | V | A | -1.7169 | |
| 1185 | V | A | 0.0000 | |
| 1186 | K | A | -2.9885 | |
| 1187 | N | A | -3.1379 | |
| 1188 | K | A | -3.4207 | |
| 1189 | E | A | -2.5045 | |
| 1190 | Y | A | 0.0000 | |
| 1191 | R | A | 0.0000 | |
| 1192 | L | A | 0.0000 | |
| 1193 | A | A | 0.0000 | |
| 1194 | T | A | 0.0000 | |
| 1195 | N | A | -0.6632 | |
| 1196 | A | A | -0.6811 | |
| 1197 | S | A | -0.6038 | |
| 1198 | Q | A | -0.7098 | |
| 1199 | A | A | -0.4131 | |
| 1200 | G | A | -0.3845 | |
| 1201 | V | A | 0.2915 | |
| 1202 | E | A | -0.2316 | |
| 1203 | K | A | -0.4588 | |
| 1204 | I | A | 0.2538 | |
| 1205 | L | A | 0.0000 | |
| 1206 | S | A | 0.0000 | |
| 1207 | A | A | 0.0000 | |
| 1208 | L | A | 0.0000 | |
| 1209 | E | A | -1.7822 | |
| 1210 | I | A | -0.9891 | |
| 1211 | P | A | -1.3073 | |
| 1212 | D | A | -2.1746 | |
| 1213 | V | A | -1.2291 | |
| 1214 | G | A | -1.6015 | |
| 1215 | N | A | -1.9575 | |
| 1216 | L | A | -1.0145 | |
| 1217 | S | A | 0.0000 | |
| 1218 | Q | A | 0.0000 | |
| 1219 | V | A | 0.0000 | |
| 1220 | V | A | 0.0000 | |
| 1221 | V | A | 0.0000 | |
| 1222 | M | A | 0.0000 | |
| 1223 | K | A | -1.9418 | |
| 1224 | S | A | 0.0000 | |
| 1225 | K | A | -1.9459 | |
| 1226 | D | A | -2.0490 | |
| 1227 | D | A | -2.5120 | |
| 1228 | Q | A | -1.9029 | |
| 1229 | G | A | -1.0234 | |
| 1230 | I | A | 0.2126 | |
| 1231 | R | A | -1.3774 | |
| 1232 | N | A | -2.1409 | |
| 1233 | K | A | -2.4574 | |
| 1234 | C | A | 0.0000 | |
| 1235 | K | A | -0.9863 | |
| 1236 | M | A | 0.0000 | |
| 1237 | N | A | 0.0000 | |
| 1238 | L | A | 0.0000 | |
| 1239 | Q | A | 0.0000 | |
| 1240 | D | A | -2.3426 | |
| 1241 | N | A | -2.7401 | |
| 1242 | N | A | -2.7224 | |
| 1243 | G | A | -2.4088 | |
| 1244 | N | A | -2.6637 | |
| 1245 | D | A | -2.0758 | |
| 1246 | I | A | 0.0000 | |
| 1247 | G | A | 0.0000 | |
| 1248 | F | A | 0.0000 | |
| 1249 | I | A | 0.0000 | |
| 1250 | G | A | 0.0000 | |
| 1251 | F | A | 0.7327 | |
| 1252 | H | A | -0.0066 | |
| 1253 | L | A | 0.4869 | |
| 1254 | Y | A | -0.2753 | |
| 1255 | D | A | -1.7829 | |
| 1256 | N | A | -1.3964 | |
| 1257 | I | A | -0.0904 | |
| 1258 | A | A | 0.0000 | |
| 1259 | K | A | -0.0289 | |
| 1260 | L | A | 0.0000 | |
| 1261 | V | A | 0.0000 | |
| 1262 | A | A | 0.0000 | |
| 1263 | S | A | 0.0000 | |
| 1264 | N | A | -0.2443 | |
| 1265 | W | A | 0.3983 | |
| 1266 | Y | A | 0.0000 | |
| 1267 | N | A | -1.1021 | |
| 1268 | R | A | -1.9074 | |
| 1269 | Q | A | -1.7056 | |
| 1270 | V | A | -1.8084 | |
| 1271 | G | A | -2.2683 | |
| 1272 | K | A | -2.6237 | |
| 1273 | A | A | -2.0197 | |
| 1274 | S | A | -1.7548 | |
| 1275 | R | A | -1.7178 | |
| 1276 | T | A | 0.1959 | |
| 1277 | F | A | 2.0274 | |
| 1278 | G | A | 0.0000 | |
| 1279 | C | A | 0.0000 | |
| 1280 | S | A | 0.0775 | |
| 1281 | W | A | 0.0000 | |
| 1282 | E | A | 0.0000 | |
| 1283 | F | A | 0.0000 | |
| 1284 | I | A | 0.0000 | |
| 1285 | P | A | 0.3540 | |
| 1286 | V | A | 1.0230 | |
| 1287 | D | A | -0.4239 | |
| 1288 | D | A | -1.7419 | |
| 1289 | G | A | 0.0000 | |
| 1290 | W | A | 0.0000 | |
| 1291 | G | A | -0.8857 | |
| 1292 | E | A | -0.4473 | |
| 1293 | S | A | -0.4572 | |
| 1294 | S | A | -0.1565 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine