Project name: query_structure

Status: done

Started: 2026-03-16 20:28:16
Settings
Chain sequence(s) A: LPAPKNLVVSEVTEDSLRLSWGYNGDHFDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:48)
Show buried residues

Minimal score value
-3.0298
Maximal score value
1.2496
Average score
-1.0638
Total score value
-100.0017

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.3473
2 P A -0.2346
3 A A -0.1357
4 P A 0.0000
5 K A -1.9966
6 N A -1.4414
7 L A -0.1688
8 V A 0.7936
9 V A -0.0007
10 S A -0.6827
11 E A -1.9990
12 V A -0.9482
13 T A -1.7683
14 E A -3.0298
15 D A -2.8345
16 S A -2.1482
17 L A 0.0000
18 R A -1.5081
19 L A 0.0000
20 S A -0.5264
21 W A 0.0000
22 G A -1.2943
23 Y A -1.5084
24 N A -1.9805
25 G A -1.6349
26 D A -1.8807
27 H A -2.1212
28 F A 0.0000
29 D A -2.7064
30 S A -1.8657
31 F A 0.0000
32 L A -0.3246
33 I A 0.0000
34 Q A -0.5931
35 Y A -0.6846
36 Q A -1.5327
37 E A -2.0516
38 S A -1.9882
39 E A -2.5050
40 K A -1.9029
41 V A 0.0236
42 G A -0.9478
43 E A -2.1074
44 A A -1.0276
45 I A -0.5021
46 N A -1.0555
47 L A -0.1335
48 T A -0.2112
49 V A 0.0000
50 P A -1.1566
51 G A -1.6827
52 S A -1.4478
53 E A -1.4688
54 R A -1.0041
55 S A -0.8092
56 Y A -0.8965
57 D A -1.8193
58 L A 0.0000
59 T A -1.4516
60 G A -1.5307
61 L A 0.0000
62 K A -2.9499
63 P A -2.4981
64 G A -1.7894
65 T A -2.0713
66 E A -2.4072
67 Y A 0.0000
68 T A -1.4027
69 V A 0.0000
70 S A -0.2751
71 I A 0.0000
72 Y A 0.0000
73 G A 0.0000
74 V A -1.3526
75 H A -1.8293
76 N A -2.3362
77 V A -0.4823
78 Y A -0.0565
79 K A -2.1343
80 D A -2.6633
81 T A -1.8916
82 N A -2.4722
83 M A -1.1874
84 R A -1.4799
85 G A 0.0000
86 L A 1.2496
87 P A 0.3870
88 L A 0.0397
89 S A -0.2640
90 A A -0.5839
91 E A -2.0894
92 F A 0.0000
93 T A -1.5014
94 T A -1.8743
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Laboratory of Theory of Biopolymers 2018