| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVLYYHITYGETGSYGGVQEFTVPGSKSTATISGLKPGVDYTITVYAYFGYYQPWSERYSSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7815 | |
| 2 | S | A | 0.7842 | |
| 3 | S | A | 0.6427 | |
| 4 | V | A | 0.4740 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5529 | |
| 7 | K | A | -2.4257 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.1949 | |
| 10 | V | A | 0.4642 | |
| 11 | V | A | 1.7355 | |
| 12 | A | A | 0.9918 | |
| 13 | A | A | 0.2980 | |
| 14 | T | A | -0.5241 | |
| 15 | P | A | -1.1187 | |
| 16 | T | A | -0.9998 | |
| 17 | S | A | -0.5355 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.8565 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.6967 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5594 | |
| 24 | A | A | -1.2257 | |
| 25 | P | A | -0.0131 | |
| 26 | A | A | 0.4149 | |
| 27 | V | A | 0.8280 | |
| 28 | T | A | 0.4571 | |
| 29 | V | A | 0.5963 | |
| 30 | L | A | 1.0013 | |
| 31 | Y | A | 0.6139 | |
| 32 | Y | A | 0.0000 | |
| 33 | H | A | -0.0834 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.6181 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -0.5386 | |
| 38 | E | A | -1.3376 | |
| 39 | T | A | -0.9389 | |
| 40 | G | A | -0.5666 | |
| 41 | S | A | 0.0287 | |
| 42 | Y | A | 1.0842 | |
| 43 | G | A | 0.2461 | |
| 44 | G | A | -0.0723 | |
| 45 | V | A | 0.4998 | |
| 46 | Q | A | -1.2586 | |
| 47 | E | A | -1.7722 | |
| 48 | F | A | -0.6852 | |
| 49 | T | A | -0.1803 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.3682 | |
| 52 | G | A | -0.1686 | |
| 53 | S | A | -0.7380 | |
| 54 | K | A | -1.6839 | |
| 55 | S | A | -1.2583 | |
| 56 | T | A | -0.6002 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2368 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6613 | |
| 61 | G | A | -1.0318 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3795 | |
| 64 | P | A | -1.6406 | |
| 65 | G | A | -1.4356 | |
| 66 | V | A | -1.4405 | |
| 67 | D | A | -2.1063 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8773 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1451 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.6728 | |
| 74 | A | A | 0.0000 | |
| 75 | Y | A | 0.2760 | |
| 76 | F | A | 0.0000 | |
| 77 | G | A | -0.2345 | |
| 78 | Y | A | 0.3253 | |
| 79 | Y | A | 1.0558 | |
| 80 | Q | A | -0.2415 | |
| 81 | P | A | -0.2147 | |
| 82 | W | A | 0.2214 | |
| 83 | S | A | -0.8415 | |
| 84 | E | A | -1.9162 | |
| 85 | R | A | -1.8209 | |
| 86 | Y | A | 0.2119 | |
| 87 | S | A | 0.0000 | |
| 88 | S | A | 0.0841 | |
| 89 | P | A | 0.2680 | |
| 90 | I | A | 0.1138 | |
| 91 | S | A | -0.2722 | |
| 92 | I | A | -0.5936 | |
| 93 | N | A | -1.7107 | |
| 94 | Y | A | -1.4421 | |
| 95 | R | A | -2.5595 | |
| 96 | T | A | -1.5033 |