| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFWIRYFEFLGSGEAIVLTVPGSERSYDLTGLKPGTEYVVNIMGVKGGKISPPLSAIFTTGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9026 | |
| 2 | L | A | 0.3005 | |
| 3 | P | A | -0.0300 | |
| 4 | A | A | -0.3412 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.8018 | |
| 7 | N | A | -1.3964 | |
| 8 | L | A | -0.1347 | |
| 9 | V | A | 1.2206 | |
| 10 | V | A | 0.6196 | |
| 11 | S | A | -0.5909 | |
| 12 | R | A | -1.8379 | |
| 13 | V | A | -1.0329 | |
| 14 | T | A | -1.8154 | |
| 15 | E | A | -2.8988 | |
| 16 | D | A | -2.6967 | |
| 17 | S | A | -2.0286 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2085 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3399 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2004 | |
| 24 | A | A | -1.3406 | |
| 25 | P | A | -1.2962 | |
| 26 | D | A | -2.2609 | |
| 27 | A | A | -1.4141 | |
| 28 | A | A | -1.1525 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.4143 | |
| 31 | S | A | -1.1636 | |
| 32 | F | A | 0.0000 | |
| 33 | W | A | 0.5500 | |
| 34 | I | A | 0.0000 | |
| 35 | R | A | -0.0688 | |
| 36 | Y | A | 0.0000 | |
| 37 | F | A | 0.5974 | |
| 38 | E | A | 0.4156 | |
| 39 | F | A | 2.1697 | |
| 40 | L | A | 1.9015 | |
| 41 | G | A | 0.3077 | |
| 42 | S | A | -0.3758 | |
| 43 | G | A | -0.7943 | |
| 44 | E | A | -1.7365 | |
| 45 | A | A | -0.4373 | |
| 46 | I | A | 0.5249 | |
| 47 | V | A | 1.0033 | |
| 48 | L | A | 0.8248 | |
| 49 | T | A | 0.2841 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.0455 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5748 | |
| 54 | E | A | -1.4337 | |
| 55 | R | A | -1.0883 | |
| 56 | S | A | -0.6115 | |
| 57 | Y | A | -0.7183 | |
| 58 | D | A | -1.7146 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4153 | |
| 61 | G | A | -1.4611 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9494 | |
| 64 | P | A | -2.5759 | |
| 65 | G | A | -1.9268 | |
| 66 | T | A | -1.2325 | |
| 67 | E | A | -0.0205 | |
| 68 | Y | A | 0.0000 | |
| 69 | V | A | 1.1166 | |
| 70 | V | A | 0.0000 | |
| 71 | N | A | -0.0261 | |
| 72 | I | A | 0.0000 | |
| 73 | M | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.0781 | |
| 76 | K | A | -1.9822 | |
| 77 | G | A | -1.7685 | |
| 78 | G | A | -1.7435 | |
| 79 | K | A | -1.6980 | |
| 80 | I | A | -0.2463 | |
| 81 | S | A | 0.0000 | |
| 82 | P | A | -0.1054 | |
| 83 | P | A | -0.4238 | |
| 84 | L | A | -0.5272 | |
| 85 | S | A | -0.0556 | |
| 86 | A | A | 0.9085 | |
| 87 | I | A | 1.7808 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.5270 | |
| 90 | T | A | 0.0000 | |
| 91 | G | A | -1.7939 | |
| 92 | G | A | -1.7291 |