| Chain sequence(s) |
A: GGGGSGGGGSGGGGS
C: GGGGSGGGGSGGGGS B: GGGGSGGGGSGGGGS D: GGGGSGGGGSGGGGS input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.6862 | |
| 2 | G | A | -1.7163 | |
| 3 | G | A | -1.9313 | |
| 4 | G | A | -1.5805 | |
| 5 | S | A | -1.3273 | |
| 6 | G | A | -1.5094 | |
| 7 | G | A | -1.4820 | |
| 8 | G | A | -1.7664 | |
| 9 | G | A | -1.5598 | |
| 10 | S | A | -1.3529 | |
| 11 | G | A | -1.5759 | |
| 12 | G | A | -1.5536 | |
| 13 | G | A | -1.6965 | |
| 14 | G | A | -1.5451 | |
| 15 | S | A | -0.9587 | |
| 1 | G | B | -1.5259 | |
| 2 | G | B | -1.7751 | |
| 3 | G | B | -1.6779 | |
| 4 | G | B | -1.7507 | |
| 5 | S | B | -1.3056 | |
| 6 | G | B | -1.5070 | |
| 7 | G | B | -1.5295 | |
| 8 | G | B | -1.5497 | |
| 9 | G | B | -1.7175 | |
| 10 | S | B | -1.3772 | |
| 11 | G | B | -1.5264 | |
| 12 | G | B | -1.6850 | |
| 13 | G | B | -1.5346 | |
| 14 | G | B | -1.5185 | |
| 15 | S | B | -0.9498 | |
| 1 | G | C | -1.5624 | |
| 2 | G | C | -2.0480 | |
| 3 | G | C | -1.8197 | |
| 4 | G | C | -1.6731 | |
| 5 | S | C | -1.5415 | |
| 6 | G | C | -1.4584 | |
| 7 | G | C | -1.7284 | |
| 8 | G | C | -1.6208 | |
| 9 | G | C | -1.5771 | |
| 10 | S | C | -1.5258 | |
| 11 | G | C | -1.4999 | |
| 12 | G | C | -1.7412 | |
| 13 | G | C | -1.7985 | |
| 14 | G | C | -1.4951 | |
| 15 | S | C | -1.0865 | |
| 1 | G | D | -1.5282 | |
| 2 | G | D | -1.8212 | |
| 3 | G | D | -1.9204 | |
| 4 | G | D | -1.3767 | |
| 5 | S | D | -1.3157 | |
| 6 | G | D | -1.3081 | |
| 7 | G | D | -1.5081 | |
| 8 | G | D | -1.6799 | |
| 9 | G | D | -1.2878 | |
| 10 | S | D | -1.3205 | |
| 11 | G | D | -1.4169 | |
| 12 | G | D | -1.4111 | |
| 13 | G | D | -1.7621 | |
| 14 | G | D | -1.3253 | |
| 15 | S | D | -0.8310 |