| Chain sequence(s) |
A: EVQLQASGGGLVQPRGSLRLSCAASGSIFSINAMGWYRQTPEKQRELVATISSSGSTKYGDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNTQTAGLVADWGTSHYDYWGQGVQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:44)
[INFO] Main: Simulation completed successfully. (00:02:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9505 | |
| 2 | V | A | -1.2528 | |
| 3 | Q | A | -1.8900 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7013 | |
| 6 | A | A | -1.1413 | |
| 7 | S | A | -1.1080 | |
| 8 | G | A | -1.1054 | |
| 9 | G | A | -0.7749 | |
| 10 | G | A | -0.0394 | |
| 11 | L | A | 1.0476 | |
| 12 | V | A | -0.1701 | |
| 13 | Q | A | -1.5695 | |
| 14 | P | A | -2.0831 | |
| 15 | R | A | -2.6733 | |
| 16 | G | A | -1.5718 | |
| 17 | S | A | -1.5947 | |
| 18 | L | A | -1.1245 | |
| 19 | R | A | -2.2633 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8789 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1999 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2081 | |
| 26 | G | A | -0.5966 | |
| 27 | S | A | -0.1235 | |
| 28 | I | A | 0.0000 | |
| 29 | F | A | 1.1125 | |
| 30 | S | A | 0.1501 | |
| 31 | I | A | 0.0000 | |
| 32 | N | A | -1.3897 | |
| 33 | A | A | -0.8175 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.0581 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -2.0761 | |
| 40 | T | A | 0.0000 | |
| 41 | P | A | -1.9728 | |
| 42 | E | A | -3.1757 | |
| 43 | K | A | -3.6966 | |
| 44 | Q | A | -3.1830 | |
| 45 | R | A | -2.6164 | |
| 46 | E | A | -1.5769 | |
| 47 | L | A | -0.7427 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | -0.6220 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -1.0000 | |
| 53 | S | A | -0.6959 | |
| 54 | S | A | -0.8224 | |
| 55 | G | A | -1.1278 | |
| 56 | S | A | -0.9597 | |
| 57 | T | A | -1.1262 | |
| 58 | K | A | -2.0989 | |
| 59 | Y | A | -1.6364 | |
| 60 | G | A | -1.7194 | |
| 61 | D | A | -2.5898 | |
| 62 | S | A | -1.8154 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.8142 | |
| 65 | G | A | -1.7514 | |
| 66 | R | A | -1.4839 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.1398 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6170 | |
| 71 | R | A | -0.9266 | |
| 72 | D | A | -1.4360 | |
| 73 | N | A | -1.3782 | |
| 74 | A | A | -1.2581 | |
| 75 | K | A | -2.3479 | |
| 76 | N | A | -1.4932 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.7146 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.5740 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.6865 | |
| 84 | S | A | -1.8031 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.5318 | |
| 87 | P | A | -2.0125 | |
| 88 | E | A | -2.3030 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.9342 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.5751 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.3720 | |
| 95 | C | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | T | A | 0.0000 | |
| 98 | Q | A | -1.5000 | |
| 99 | T | A | -0.8593 | |
| 100 | A | A | -0.3315 | |
| 101 | G | A | 0.8058 | |
| 102 | L | A | 1.8075 | |
| 103 | V | A | 1.4545 | |
| 104 | A | A | 0.4383 | |
| 105 | D | A | -0.6549 | |
| 106 | W | A | 0.6674 | |
| 107 | G | A | 0.1336 | |
| 108 | T | A | 0.3071 | |
| 109 | S | A | -0.1118 | |
| 110 | H | A | -1.0810 | |
| 111 | Y | A | -0.5133 | |
| 112 | D | A | -1.4957 | |
| 113 | Y | A | -0.8096 | |
| 114 | W | A | -0.3993 | |
| 115 | G | A | -0.8524 | |
| 116 | Q | A | -1.4540 | |
| 117 | G | A | -0.8612 | |
| 118 | V | A | -0.8990 | |
| 119 | Q | A | -0.9863 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -0.2936 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.6214 |