Project name: query_structure

Status: done

Started: 2026-03-16 23:12:33
Settings
Chain sequence(s) A: EVQLQASGGGLVQPRGSLRLSCAASGSIFSINAMGWYRQTPEKQRELVATISSSGSTKYGDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNTQTAGLVADWGTSHYDYWGQGVQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:46)
Show buried residues

Minimal score value
-3.6966
Maximal score value
1.8075
Average score
-0.8333
Total score value
-102.4933

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.9505
2 V A -1.2528
3 Q A -1.8900
4 L A 0.0000
5 Q A -1.7013
6 A A -1.1413
7 S A -1.1080
8 G A -1.1054
9 G A -0.7749
10 G A -0.0394
11 L A 1.0476
12 V A -0.1701
13 Q A -1.5695
14 P A -2.0831
15 R A -2.6733
16 G A -1.5718
17 S A -1.5947
18 L A -1.1245
19 R A -2.2633
20 L A 0.0000
21 S A -0.8789
22 C A 0.0000
23 A A -1.1999
24 A A 0.0000
25 S A -1.2081
26 G A -0.5966
27 S A -0.1235
28 I A 0.0000
29 F A 1.1125
30 S A 0.1501
31 I A 0.0000
32 N A -1.3897
33 A A -0.8175
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A -0.0581
38 R A 0.0000
39 Q A -2.0761
40 T A 0.0000
41 P A -1.9728
42 E A -3.1757
43 K A -3.6966
44 Q A -3.1830
45 R A -2.6164
46 E A -1.5769
47 L A -0.7427
48 V A 0.0000
49 A A 0.0000
50 T A -0.6220
51 I A 0.0000
52 S A -1.0000
53 S A -0.6959
54 S A -0.8224
55 G A -1.1278
56 S A -0.9597
57 T A -1.1262
58 K A -2.0989
59 Y A -1.6364
60 G A -1.7194
61 D A -2.5898
62 S A -1.8154
63 V A 0.0000
64 K A -2.8142
65 G A -1.7514
66 R A -1.4839
67 F A 0.0000
68 T A -1.1398
69 I A 0.0000
70 S A -0.6170
71 R A -0.9266
72 D A -1.4360
73 N A -1.3782
74 A A -1.2581
75 K A -2.3479
76 N A -1.4932
77 T A 0.0000
78 V A 0.0000
79 Y A -0.7146
80 L A 0.0000
81 Q A -1.5740
82 M A 0.0000
83 N A -1.6865
84 S A -1.8031
85 L A 0.0000
86 K A -2.5318
87 P A -2.0125
88 E A -2.3030
89 D A 0.0000
90 T A -0.9342
91 A A 0.0000
92 V A -0.5751
93 Y A 0.0000
94 Y A -0.3720
95 C A 0.0000
96 N A 0.0000
97 T A 0.0000
98 Q A -1.5000
99 T A -0.8593
100 A A -0.3315
101 G A 0.8058
102 L A 1.8075
103 V A 1.4545
104 A A 0.4383
105 D A -0.6549
106 W A 0.6674
107 G A 0.1336
108 T A 0.3071
109 S A -0.1118
110 H A -1.0810
111 Y A -0.5133
112 D A -1.4957
113 Y A -0.8096
114 W A -0.3993
115 G A -0.8524
116 Q A -1.4540
117 G A -0.8612
118 V A -0.8990
119 Q A -0.9863
120 V A 0.0000
121 T A -0.2936
122 V A 0.0000
123 S A -0.6214
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Laboratory of Theory of Biopolymers 2018