| Chain sequence(s) |
A: MSHHHHHHSGWKKDYTIQDAMWYGDTREDAIEYLMRQLNRFVKAGDVEEVIIIFWEILQEFVRDMTRAKTVSRMKNRYKQYDRFVRMFKEFVETWEPEDPSVKELLEDILEQMMKGRTLLKNPTDVEAVQEFFKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:45)
[INFO] Main: Simulation completed successfully. (00:04:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5548 | |
| 2 | S | A | -0.5950 | |
| 3 | H | A | -1.7239 | |
| 4 | H | A | -2.3189 | |
| 5 | H | A | -2.7271 | |
| 6 | H | A | -2.7315 | |
| 7 | H | A | -2.5338 | |
| 8 | H | A | -1.9934 | |
| 9 | S | A | -1.2874 | |
| 10 | G | A | -1.2106 | |
| 11 | W | A | -0.8273 | |
| 12 | K | A | -2.4487 | |
| 13 | K | A | -2.6145 | |
| 14 | D | A | -2.1078 | |
| 15 | Y | A | -0.0726 | |
| 16 | T | A | -0.0179 | |
| 17 | I | A | 0.6439 | |
| 18 | Q | A | 0.1327 | |
| 19 | D | A | 0.8157 | |
| 20 | A | A | 0.0000 | |
| 21 | M | A | 0.4840 | |
| 22 | W | A | 1.3617 | |
| 23 | Y | A | 1.2307 | |
| 24 | G | A | -0.4653 | |
| 25 | D | A | -1.7539 | |
| 26 | T | A | -1.6045 | |
| 27 | R | A | -1.7758 | |
| 28 | E | A | -2.1576 | |
| 29 | D | A | -1.4927 | |
| 30 | A | A | 0.0000 | |
| 31 | I | A | 0.0000 | |
| 32 | E | A | -0.9209 | |
| 33 | Y | A | -0.0052 | |
| 34 | L | A | 0.0000 | |
| 35 | M | A | -1.2079 | |
| 36 | R | A | -2.1523 | |
| 37 | Q | A | -1.7874 | |
| 38 | L | A | 0.0000 | |
| 39 | N | A | -2.2046 | |
| 40 | R | A | -2.8398 | |
| 41 | F | A | -2.2202 | |
| 42 | V | A | -1.9593 | |
| 43 | K | A | -2.3385 | |
| 44 | A | A | -1.6438 | |
| 45 | G | A | -1.8349 | |
| 46 | D | A | -2.3367 | |
| 47 | V | A | -1.2682 | |
| 48 | E | A | -1.9803 | |
| 49 | E | A | -1.6032 | |
| 50 | V | A | 0.0000 | |
| 51 | I | A | 0.2502 | |
| 52 | I | A | 1.1152 | |
| 53 | I | A | 0.0000 | |
| 54 | F | A | 0.0000 | |
| 55 | W | A | 0.5796 | |
| 56 | E | A | -0.3360 | |
| 57 | I | A | 0.0000 | |
| 58 | L | A | -0.0754 | |
| 59 | Q | A | -1.1081 | |
| 60 | E | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | V | A | -1.4454 | |
| 63 | R | A | -2.0147 | |
| 64 | D | A | 0.0000 | |
| 65 | M | A | 0.0000 | |
| 66 | T | A | -2.6875 | |
| 67 | R | A | -2.8993 | |
| 68 | A | A | 0.0000 | |
| 69 | K | A | -2.5325 | |
| 70 | T | A | -1.5966 | |
| 71 | V | A | -1.1793 | |
| 72 | S | A | -1.2654 | |
| 73 | R | A | -2.1946 | |
| 74 | M | A | 0.0000 | |
| 75 | K | A | -2.5672 | |
| 76 | N | A | -2.6590 | |
| 77 | R | A | 0.0000 | |
| 78 | Y | A | -2.2913 | |
| 79 | K | A | -2.6618 | |
| 80 | Q | A | 0.0000 | |
| 81 | Y | A | 0.0000 | |
| 82 | D | A | 0.0000 | |
| 83 | R | A | -2.5424 | |
| 84 | F | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | R | A | -2.9525 | |
| 87 | M | A | -2.1754 | |
| 88 | F | A | 0.0000 | |
| 89 | K | A | -3.1578 | |
| 90 | E | A | -3.1480 | |
| 91 | F | A | 0.0000 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | -3.1519 | |
| 94 | T | A | -1.8932 | |
| 95 | W | A | -1.8164 | |
| 96 | E | A | -2.6812 | |
| 97 | P | A | -2.1392 | |
| 98 | E | A | -2.9159 | |
| 99 | D | A | -2.7525 | |
| 100 | P | A | -1.9158 | |
| 101 | S | A | -1.1705 | |
| 102 | V | A | -0.6380 | |
| 103 | K | A | -2.1531 | |
| 104 | E | A | -2.3756 | |
| 105 | L | A | -0.7308 | |
| 106 | L | A | 0.0000 | |
| 107 | E | A | -3.4516 | |
| 108 | D | A | -3.0920 | |
| 109 | I | A | -1.7559 | |
| 110 | L | A | 0.0000 | |
| 111 | E | A | -2.8426 | |
| 112 | Q | A | -2.1650 | |
| 113 | M | A | 0.0000 | |
| 114 | M | A | -1.4570 | |
| 115 | K | A | -1.5390 | |
| 116 | G | A | 0.0000 | |
| 117 | R | A | -1.6513 | |
| 118 | T | A | -1.0595 | |
| 119 | L | A | -0.8854 | |
| 120 | L | A | 0.0000 | |
| 121 | K | A | -2.2726 | |
| 122 | N | A | -2.0180 | |
| 123 | P | A | 0.0000 | |
| 124 | T | A | -1.1773 | |
| 125 | D | A | -1.9309 | |
| 126 | V | A | -1.8695 | |
| 127 | E | A | -2.8524 | |
| 128 | A | A | -1.9717 | |
| 129 | V | A | 0.0000 | |
| 130 | Q | A | -3.0892 | |
| 131 | E | A | -3.1833 | |
| 132 | F | A | -1.9749 | |
| 133 | F | A | 0.0000 | |
| 134 | K | A | -3.3575 | |
| 135 | N | A | -2.6179 | |
| 136 | S | A | -1.6529 |