Project name: query_structure

Status: done

Started: 2026-03-16 23:49:46
Settings
Chain sequence(s) A: KCLPPGKPCYGATQKIPCCGVCSHNKCT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-2.1611
Maximal score value
1.569
Average score
-0.3214
Total score value
-9.0

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.0492
2 C A 0.4277
3 L A 0.2445
4 P A -0.4175
5 P A -0.5386
6 G A -1.3828
7 K A -1.5538
8 P A -1.6573
9 C A 0.0000
10 Y A 0.3357
11 G A -0.3299
12 A A 0.0064
13 T A -0.1914
14 Q A -0.6247
15 K A -1.1815
16 I A 0.6431
17 P A 0.5458
18 C A 0.6923
19 C A 1.1338
20 G A 0.9015
21 V A 1.5690
22 C A 0.3025
23 S A -0.9812
24 H A -1.6906
25 N A -2.1003
26 K A -2.1611
27 C A 0.0000
28 T A 0.0576
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Laboratory of Theory of Biopolymers 2018