| Chain sequence(s) |
A: GSPIQCAETCFIGKCYTEELGCTCTAFLCMKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1546 | |
| 2 | S | A | -0.3432 | |
| 3 | P | A | 0.3923 | |
| 4 | I | A | 1.2371 | |
| 5 | Q | A | -0.5702 | |
| 6 | C | A | 0.0000 | |
| 7 | A | A | 0.2401 | |
| 8 | E | A | 0.4014 | |
| 9 | T | A | 1.5002 | |
| 10 | C | A | 0.0000 | |
| 11 | F | A | 3.2803 | |
| 12 | I | A | 2.7607 | |
| 13 | G | A | 1.2385 | |
| 14 | K | A | -0.3781 | |
| 15 | C | A | -0.0321 | |
| 16 | Y | A | 0.1056 | |
| 17 | T | A | -0.9744 | |
| 18 | E | A | -2.2472 | |
| 19 | E | A | -1.9044 | |
| 20 | L | A | -0.4912 | |
| 21 | G | A | -1.2403 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.7733 | |
| 24 | C | A | 0.8727 | |
| 25 | T | A | 0.9473 | |
| 26 | A | A | 1.4836 | |
| 27 | F | A | 2.9768 | |
| 28 | L | A | 1.8301 | |
| 29 | C | A | 0.0000 | |
| 30 | M | A | -0.3492 | |
| 31 | K | A | -1.3519 | |
| 32 | N | A | -1.8089 |