Project name: query_structure

Status: done

Started: 2026-03-17 00:30:13
Settings
Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSSAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYSAAHSWVTDYYPFEHYYWGQGTQVTVSSLE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:52)
Show buried residues

Minimal score value
-3.0564
Maximal score value
1.8517
Average score
-0.5754
Total score value
-71.349

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.2558
2 V A -0.4438
3 Q A -1.6430
4 L A 0.0000
5 Q A -1.7293
6 E A 0.0000
7 S A -1.0920
8 G A -0.9862
9 G A -0.8023
10 G A -0.0558
11 L A 1.0659
12 V A 0.2454
13 Q A -1.1835
14 A A -1.3393
15 G A -1.2498
16 G A -0.8176
17 S A -1.2309
18 L A -1.0805
19 R A -2.2394
20 L A 0.0000
21 S A -0.8989
22 S A 0.0000
23 A A -1.1301
24 A A -0.6339
25 S A -0.6712
26 G A 0.1458
27 Y A 0.5957
28 I A 0.0000
29 S A -1.2742
30 D A -1.5268
31 A A 0.0000
32 Y A 0.0012
33 Y A 0.2093
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A 0.1223
38 R A 0.0000
39 Q A -1.7394
40 A A -1.7684
41 P A -1.2368
42 G A -1.6681
43 K A -2.6679
44 E A -3.0564
45 R A -2.2203
46 E A -1.0145
47 F A 0.3256
48 V A 0.0000
49 A A 0.0000
50 T A 0.4400
51 I A 0.0000
52 T A 0.0000
53 H A -1.7726
54 G A -1.1944
55 T A -1.1123
56 N A -1.3138
57 T A -0.0839
58 Y A 0.8291
59 Y A 0.0080
60 A A -0.8059
61 D A -2.2028
62 S A -1.7232
63 V A 0.0000
64 K A -2.4240
65 G A -1.7451
66 R A -1.4615
67 F A 0.0000
68 T A -0.7887
69 I A 0.0000
70 S A -0.6319
71 R A -1.1260
72 D A -1.6748
73 N A -2.0984
74 A A -1.3183
75 K A -2.0773
76 N A -1.4922
77 T A 0.0000
78 V A 0.0000
79 Y A -0.6423
80 L A 0.0000
81 Q A -1.5452
82 M A 0.0000
83 N A -1.3373
84 S A -1.0864
85 L A 0.0000
86 K A -2.0463
87 P A -1.5657
88 E A -2.2176
89 D A 0.0000
90 T A -0.8703
91 A A 0.0000
92 V A -0.6135
93 Y A 0.0000
94 Y A -0.3591
95 S A 0.0000
96 A A 0.0000
97 A A 0.0000
98 H A 0.2915
99 S A 0.2184
100 W A 0.6206
101 V A 0.5330
102 T A 0.3674
103 D A -0.3815
104 Y A 1.3312
105 Y A 1.8517
106 P A 0.9754
107 F A 1.4425
108 E A -0.4359
109 H A 0.1483
110 Y A 1.1833
111 Y A 0.4262
112 W A 0.4019
113 G A -0.6689
114 Q A -1.4569
115 G A -0.9930
116 T A 0.0000
117 Q A -1.0676
118 V A 0.0000
119 T A -0.2448
120 V A 0.0000
121 S A -0.4052
122 S A -0.4166
123 L A 0.3144
124 E A -1.3858
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Laboratory of Theory of Biopolymers 2018