Project name: query_structure

Status: done

Started: 2026-03-16 23:26:21
Settings
Chain sequence(s) A: GLPICGETCVGGSCNTPGCSCSWPVCTRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:06)
Show buried residues

Minimal score value
-1.8207
Maximal score value
1.7507
Average score
0.0722
Total score value
2.0944

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.4236
2 L A 1.4509
3 P A 0.2916
4 I A 1.0550
5 C A 0.0059
6 G A -0.0189
7 E A -0.0374
8 T A 0.6070
9 C A 0.0000
10 V A 1.7507
11 G A 0.2994
12 G A 0.1230
13 S A -0.1759
14 C A -0.3557
15 N A -1.3567
16 T A -1.0641
17 P A -0.9466
18 G A -1.3620
19 C A -1.0729
20 S A -0.3408
21 C A 0.6968
22 S A 1.0923
23 W A 1.7016
24 P A 1.3261
25 V A 1.2907
26 C A 0.0000
27 T A 0.0079
28 R A -1.4764
29 N A -1.8207
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Laboratory of Theory of Biopolymers 2018