| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARRLARRGGVKRISALIYEETRGVLKVDVFLKDLEPPIVVRFVRLIPVTDHSNAVMLSENRSLFFLRDIVEFRCHPGMTEYKLVVVGADGVGKSALTIQLITPSSYIETLPKAIKRRINALKQLQVSLFGSSRVQYVVNPAVKIVFLNIDPSDFPNWHTAYYFKQYFHFRDDLEVQYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:29)
[INFO] Main: Simulation completed successfully. (00:03:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1897 | |
| 2 | D | A | -1.0058 | |
| 3 | A | A | -0.4980 | |
| 4 | M | A | -0.5582 | |
| 5 | K | A | -2.3023 | |
| 6 | R | A | -2.4859 | |
| 7 | G | A | -0.7846 | |
| 8 | L | A | 1.6310 | |
| 9 | C | A | 2.0955 | |
| 10 | C | A | 2.7375 | |
| 11 | V | A | 3.5558 | |
| 12 | L | A | 3.6642 | |
| 13 | L | A | 3.6056 | |
| 14 | L | A | 2.8853 | |
| 15 | C | A | 1.5639 | |
| 16 | G | A | 0.8852 | |
| 17 | A | A | 1.8074 | |
| 18 | V | A | 3.0953 | |
| 19 | F | A | 3.5504 | |
| 20 | V | A | 3.0498 | |
| 21 | S | A | 1.1685 | |
| 22 | P | A | -0.2468 | |
| 23 | S | A | -1.0219 | |
| 24 | Q | A | -1.8462 | |
| 25 | E | A | -1.5123 | |
| 26 | I | A | 0.3700 | |
| 27 | H | A | -1.3581 | |
| 28 | A | A | -1.3236 | |
| 29 | R | A | -2.3293 | |
| 30 | R | A | -2.6490 | |
| 31 | L | A | -0.6924 | |
| 32 | A | A | -1.5443 | |
| 33 | R | A | -2.8502 | |
| 34 | R | A | -2.8177 | |
| 35 | G | A | -2.1681 | |
| 36 | G | A | -1.8493 | |
| 37 | V | A | -1.6537 | |
| 38 | K | A | -3.2126 | |
| 39 | R | A | -2.9775 | |
| 40 | I | A | -1.0865 | |
| 41 | S | A | -0.9521 | |
| 42 | A | A | 0.2306 | |
| 43 | L | A | 1.1385 | |
| 44 | I | A | 0.9099 | |
| 45 | Y | A | -0.6333 | |
| 46 | E | A | -2.7695 | |
| 47 | E | A | -3.2150 | |
| 48 | T | A | -2.5337 | |
| 49 | R | A | -2.7971 | |
| 50 | G | A | -2.4837 | |
| 51 | V | A | 0.0000 | |
| 52 | L | A | 0.0000 | |
| 53 | K | A | -1.2009 | |
| 54 | V | A | 0.0000 | |
| 55 | D | A | 0.1582 | |
| 56 | V | A | 0.6232 | |
| 57 | F | A | 0.4678 | |
| 58 | L | A | -0.6545 | |
| 59 | K | A | -2.1757 | |
| 60 | D | A | -3.2856 | |
| 61 | L | A | -2.3772 | |
| 62 | E | A | -3.0997 | |
| 63 | P | A | -1.4682 | |
| 64 | P | A | -0.8205 | |
| 65 | I | A | 0.2950 | |
| 66 | V | A | 1.7213 | |
| 67 | V | A | 0.0000 | |
| 68 | R | A | -0.8520 | |
| 69 | F | A | 0.2426 | |
| 70 | V | A | 0.0000 | |
| 71 | R | A | -0.3768 | |
| 72 | L | A | 0.0000 | |
| 73 | I | A | 0.0580 | |
| 74 | P | A | 0.0000 | |
| 75 | V | A | -0.0429 | |
| 76 | T | A | -0.6477 | |
| 77 | D | A | -1.1791 | |
| 78 | H | A | -1.2427 | |
| 79 | S | A | -0.9676 | |
| 80 | N | A | -1.4344 | |
| 81 | A | A | -0.5411 | |
| 82 | V | A | 0.5939 | |
| 83 | M | A | -0.1669 | |
| 84 | L | A | 0.0197 | |
| 85 | S | A | -1.0736 | |
| 86 | E | A | -2.8662 | |
| 87 | N | A | -2.6531 | |
| 88 | R | A | -2.9451 | |
| 89 | S | A | -1.3402 | |
| 90 | L | A | -0.2475 | |
| 91 | F | A | 0.0000 | |
| 92 | F | A | 0.1485 | |
| 93 | L | A | -0.0673 | |
| 94 | R | A | -1.4380 | |
| 95 | D | A | -0.6239 | |
| 96 | I | A | 0.8239 | |
| 97 | V | A | 0.0000 | |
| 98 | E | A | -0.5011 | |
| 99 | F | A | 0.0000 | |
| 100 | R | A | -1.5550 | |
| 101 | C | A | -1.3528 | |
| 102 | H | A | -1.5354 | |
| 103 | P | A | -1.3805 | |
| 104 | G | A | -0.9597 | |
| 105 | M | A | -0.6682 | |
| 106 | T | A | -0.0838 | |
| 107 | E | A | -0.8388 | |
| 108 | Y | A | 0.0000 | |
| 109 | K | A | -0.6589 | |
| 110 | L | A | 0.0000 | |
| 111 | V | A | -0.2419 | |
| 112 | V | A | 0.0000 | |
| 113 | V | A | -0.4485 | |
| 114 | G | A | -0.5182 | |
| 115 | A | A | -0.7740 | |
| 116 | D | A | -1.8325 | |
| 117 | G | A | -0.6015 | |
| 118 | V | A | 0.2079 | |
| 119 | G | A | -0.7193 | |
| 120 | K | A | -1.4983 | |
| 121 | S | A | -0.6243 | |
| 122 | A | A | -0.2465 | |
| 123 | L | A | 0.4697 | |
| 124 | T | A | -0.1573 | |
| 125 | I | A | -0.2079 | |
| 126 | Q | A | -0.6731 | |
| 127 | L | A | 0.7930 | |
| 128 | I | A | 1.6393 | |
| 129 | T | A | 0.9488 | |
| 130 | P | A | 0.6115 | |
| 131 | S | A | 0.1654 | |
| 132 | S | A | -0.0296 | |
| 133 | Y | A | 0.9814 | |
| 134 | I | A | 0.4709 | |
| 135 | E | A | -1.3176 | |
| 136 | T | A | -0.4480 | |
| 137 | L | A | 0.0536 | |
| 138 | P | A | -1.0201 | |
| 139 | K | A | -2.3986 | |
| 140 | A | A | -1.4037 | |
| 141 | I | A | -0.7373 | |
| 142 | K | A | -1.9366 | |
| 143 | R | A | -3.1935 | |
| 144 | R | A | -2.6171 | |
| 145 | I | A | -1.0517 | |
| 146 | N | A | -2.4147 | |
| 147 | A | A | -1.7270 | |
| 148 | L | A | -0.6346 | |
| 149 | K | A | -2.1339 | |
| 150 | Q | A | -1.2683 | |
| 151 | L | A | 0.1615 | |
| 152 | Q | A | -0.1555 | |
| 153 | V | A | 1.3248 | |
| 154 | S | A | 0.6910 | |
| 155 | L | A | 1.0309 | |
| 156 | F | A | 2.0632 | |
| 157 | G | A | 0.3936 | |
| 158 | S | A | -0.2350 | |
| 159 | S | A | -0.6501 | |
| 160 | R | A | -1.0733 | |
| 161 | V | A | 1.0511 | |
| 162 | Q | A | 0.4914 | |
| 163 | Y | A | 2.0766 | |
| 164 | V | A | 2.6793 | |
| 165 | V | A | 1.7498 | |
| 166 | N | A | -0.1739 | |
| 167 | P | A | -0.1917 | |
| 168 | A | A | -0.3425 | |
| 169 | V | A | -0.1873 | |
| 170 | K | A | -1.1999 | |
| 171 | I | A | 0.3210 | |
| 172 | V | A | 0.3088 | |
| 173 | F | A | 0.8104 | |
| 174 | L | A | 0.5973 | |
| 175 | N | A | -0.8111 | |
| 176 | I | A | -1.3888 | |
| 177 | D | A | -2.6575 | |
| 178 | P | A | -2.0227 | |
| 179 | S | A | -1.8972 | |
| 180 | D | A | -2.6180 | |
| 181 | F | A | 0.0000 | |
| 182 | P | A | -1.2844 | |
| 183 | N | A | -1.2991 | |
| 184 | W | A | -0.5860 | |
| 185 | H | A | -0.6947 | |
| 186 | T | A | -0.5416 | |
| 187 | A | A | 0.0000 | |
| 188 | Y | A | -0.3184 | |
| 189 | Y | A | 0.6241 | |
| 190 | F | A | 0.2758 | |
| 191 | K | A | -0.8967 | |
| 192 | Q | A | -0.8113 | |
| 193 | Y | A | 0.6903 | |
| 194 | F | A | -0.2178 | |
| 195 | H | A | -1.5390 | |
| 196 | F | A | -1.4672 | |
| 197 | R | A | -3.2343 | |
| 198 | D | A | -3.6605 | |
| 199 | D | A | -3.2492 | |
| 200 | L | A | -1.9881 | |
| 201 | E | A | -2.5463 | |
| 202 | V | A | -1.4451 | |
| 203 | Q | A | -1.7667 | |
| 204 | Y | A | 0.0000 | |
| 205 | P | A | -0.7477 | |
| 206 | Y | A | -0.7977 | |
| 207 | D | A | -1.8435 | |
| 208 | V | A | -1.2302 | |
| 209 | P | A | -0.9199 | |
| 210 | D | A | -1.5310 | |
| 211 | Y | A | 0.5041 | |
| 212 | A | A | 0.1987 |