Project name: 5_i20e6_x4e7_i14e7_x11e6

Status: done

Started: 2025-08-11 18:58:45
Settings
Chain sequence(s) A: AAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:57)
Show buried residues

Minimal score value
-4.6943
Maximal score value
3.8495
Average score
-0.3662
Total score value
-95.2224

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 1.1443
2 A A 1.4069
3 Y A 2.5490
4 V A 3.0572
5 Y A 2.2721
6 D A 0.5234
7 F A 1.4023
8 A A 1.1514
9 F A 1.4283
10 R A -1.2197
11 D A -1.3270
12 L A -0.1312
13 A A -0.3617
14 A A -0.3820
15 Y A 0.1729
16 R A -1.0464
17 F A 0.2466
18 H A -0.4229
19 N A -0.3864
20 I A 1.1728
21 A A 0.6017
22 G A -0.3101
23 H A 0.1798
24 Y A 1.1665
25 A A 1.2573
26 A A 1.3218
27 Y A 2.1536
28 C A 2.1034
29 Y A 2.5426
30 S A 1.8050
31 L A 2.3767
32 Y A 2.1966
33 G A 0.9616
34 T A 0.9317
35 T A 1.0095
36 L A 1.5039
37 A A 0.6267
38 A A 0.6428
39 Y A 0.7960
40 K A -0.4336
41 T A -0.3198
42 V A 0.2929
43 L A -0.2211
44 E A -1.1655
45 L A 0.9446
46 T A 0.2387
47 E A -0.3736
48 V A 1.8996
49 A A 1.5669
50 A A 1.4830
51 Y A 2.0893
52 L A 1.8189
53 L A 1.7220
54 C A 1.2231
55 H A -0.5282
56 E A -1.7674
57 Q A -1.8190
58 L A -0.5922
59 S A -2.3690
60 D A -3.6935
61 S A -2.9193
62 E A -3.9734
63 E A -4.6943
64 E A -4.6015
65 N A -4.0146
66 D A -3.4505
67 G A -2.1429
68 P A -1.3470
69 G A -1.2796
70 P A -1.1041
71 G A -1.3899
72 Q A -1.8073
73 S A -1.0695
74 T A -0.6469
75 H A -0.3764
76 V A 1.2355
77 D A 0.0551
78 I A 0.8038
79 R A -1.3910
80 T A -0.2408
81 L A 0.8764
82 E A -1.1760
83 D A -1.1352
84 L A 1.2427
85 L A 1.7152
86 M A 1.0228
87 G A 0.0445
88 P A -0.4673
89 G A -0.8399
90 P A -0.8198
91 G A -0.8374
92 T A -0.7081
93 P A -0.3126
94 T A 0.0976
95 L A 1.4713
96 H A -0.2879
97 E A -0.5605
98 Y A 1.0404
99 M A 1.0441
100 L A 0.7555
101 D A -0.9698
102 L A 0.2760
103 Q A -1.0112
104 P A -1.5688
105 E A -2.5621
106 T A -1.5925
107 G A -1.3827
108 P A -1.0714
109 G A -0.9465
110 P A -0.6954
111 G A -0.2216
112 L A 1.2978
113 Q A 0.0199
114 D A -0.2436
115 I A 2.4533
116 V A 2.7354
117 L A 2.0249
118 H A 0.6016
119 L A 1.0649
120 E A -1.4922
121 P A -1.9652
122 Q A -2.3877
123 N A -2.4813
124 E A -1.9038
125 I A 0.3505
126 P A -0.3046
127 G A -0.5808
128 P A -0.5333
129 G A -0.7188
130 P A -0.7578
131 G A -0.6407
132 Y A -0.1691
133 R A -1.4520
134 A A -0.7734
135 H A -0.7395
136 Y A 1.1423
137 N A 1.0620
138 I A 3.1405
139 V A 3.2828
140 T A 2.6854
141 F A 3.7210
142 A A 2.4398
143 A A 2.1785
144 Y A 2.1859
145 T A 1.8468
146 L A 2.2369
147 Q A 0.7317
148 D A 0.3073
149 I A 2.4220
150 V A 3.0278
151 L A 2.5567
152 H A 2.0737
153 L A 3.2973
154 A A 2.9176
155 A A 2.8178
156 Y A 3.5330
157 L A 3.6219
158 L A 3.5959
159 M A 3.2122
160 G A 2.5242
161 T A 2.9337
162 L A 3.6716
163 G A 2.5825
164 I A 3.8191
165 V A 3.8495
166 A A 2.4246
167 A A 2.0658
168 Y A 2.1949
169 L A 1.0288
170 P A -0.6221
171 A A -1.2158
172 R A -2.8875
173 R A -3.2630
174 A A -2.6577
175 E A -3.1780
176 P A -2.2751
177 Q A -2.3954
178 A A -1.6095
179 A A -1.3494
180 Y A -0.7717
181 A A -1.4705
182 E A -3.1147
183 K A -3.0349
184 L A -2.1554
185 R A -4.0365
186 H A -4.1310
187 L A -3.3542
188 N A -4.0544
189 E A -4.5283
190 K A -4.2523
191 R A -4.5660
192 R A -3.8813
193 F A -1.5755
194 H A -2.7323
195 N A -2.6733
196 G A -1.4939
197 P A -0.9059
198 G A -1.1348
199 P A -0.7829
200 G A -0.9365
201 L A -1.3924
202 D A -2.3969
203 K A -3.1413
204 K A -3.2132
205 Q A -2.6510
206 R A -1.9129
207 F A -0.8281
208 H A -2.2304
209 N A -1.7346
210 I A 0.0132
211 R A -1.9170
212 G A -1.8665
213 R A -2.1060
214 W A -0.9204
215 T A -1.0723
216 G A -1.4125
217 P A -0.8850
218 G A -1.1092
219 P A -1.1073
220 G A -1.8419
221 N A -2.2773
222 P A -1.8408
223 A A -1.8338
224 E A -3.4900
225 K A -3.0128
226 L A -2.1475
227 R A -4.0419
228 H A -4.1416
229 L A -3.3274
230 N A -4.1493
231 E A -4.6522
232 K A -4.2548
233 R A -4.3125
234 R A -3.3984
235 F A -0.9124
236 G A -1.4560
237 P A -1.2015
238 G A -0.8072
239 P A -1.0751
240 G A -1.0753
241 S A -1.1879
242 K A -1.4762
243 I A 0.4044
244 S A -0.8713
245 E A -1.7030
246 Y A 0.1668
247 R A -1.0202
248 H A -0.7670
249 Y A 0.5479
250 C A 0.9354
251 Y A 1.4821
252 S A 0.8004
253 L A 1.6156
254 Y A 1.7938
255 G A 0.3539
256 G A -0.4039
257 P A -0.8371
258 G A -1.0351
259 P A -0.8197
260 G A -0.7423
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Laboratory of Theory of Biopolymers 2018