Project name: 406

Status: done

Started: 2025-06-26 07:52:53
Settings
Chain sequence(s) A: DPRLEQLQALLAQVRAGQVKDVYQVLAQVSVLLGQAPKEKSKELLEAATELLKAILRQANPGLLTDEQIEEQAKRILRYLLGFP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:27)
Show buried residues

Minimal score value
-4.8197
Maximal score value
1.2965
Average score
-1.3147
Total score value
-110.4389

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.6291
2 P A -2.1264
3 R A -1.8843
4 L A -2.4680
5 E A -2.9739
6 Q A -2.1009
7 L A 0.0000
8 Q A -2.2051
9 A A -1.3276
10 L A -1.1947
11 L A 0.0000
12 A A -1.4260
13 Q A -2.0578
14 V A 0.0000
15 R A -2.5614
16 A A -1.5397
17 G A -1.9217
18 Q A -2.3301
19 V A -2.0543
20 K A -2.5379
21 D A -1.8211
22 V A -0.4809
23 Y A 0.3512
24 Q A -0.9858
25 V A 0.0000
26 L A 0.5359
27 A A 0.3721
28 Q A 0.0728
29 V A 0.0000
30 S A 0.5572
31 V A 0.9305
32 L A 0.0000
33 L A 0.0000
34 G A -0.8365
35 Q A -1.3852
36 A A 0.0000
37 P A -2.1395
38 K A -3.0673
39 E A -3.1073
40 K A -2.4136
41 S A -2.6506
42 K A -3.2733
43 E A -3.3682
44 L A 0.0000
45 L A -1.8645
46 E A -3.0649
47 A A 0.0000
48 A A 0.0000
49 T A -2.2016
50 E A -2.5053
51 L A 0.0000
52 L A 0.0000
53 K A -2.6513
54 A A -1.7631
55 I A 0.0000
56 L A -1.4114
57 R A -2.5416
58 Q A -2.1613
59 A A -0.9169
60 N A -0.6629
61 P A -0.7534
62 G A -0.3955
63 L A 0.7621
64 L A -0.6970
65 T A -2.1204
66 D A -3.8691
67 E A -4.1986
68 Q A -3.4498
69 I A 0.0000
70 E A -4.8197
71 E A -4.4883
72 Q A -3.2191
73 A A 0.0000
74 K A -3.1492
75 R A -2.1416
76 I A -0.7064
77 L A 0.0000
78 R A -1.0648
79 Y A 0.6853
80 L A 0.7068
81 L A 0.1991
82 G A 0.3701
83 F A 1.2965
84 P A 0.4074
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Laboratory of Theory of Biopolymers 2018