Project name: 262e34ba8ba22ea

Status: done

Started: 2026-02-11 11:30:09
Settings
Chain sequence(s) A: GGKGHFF
C: GGKGHFF
B: GGKGHFF
D: GGKGHFF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:51)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-2.8553
Maximal score value
2.0992
Average score
-0.526
Total score value
-14.7288

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1972
2 G A -0.9442
3 K A -2.7861
4 G A 0.0000
5 H A -1.2737
6 F A 0.3745
7 F A 2.0992
1 G B -0.0084
2 G B -0.9482
3 K B -2.8553
4 G B -2.7438
5 H B -1.3271
6 F B 0.2691
7 F B 2.0699
1 G C -0.0612
2 G C -0.8191
3 K C -2.6047
4 G C 0.0000
5 H C -1.2880
6 F C 0.2908
7 F C 2.0783
1 G D -0.0615
2 G D -0.9581
3 K D -2.4531
4 G D -2.4181
5 H D -0.8241
6 F D 0.6083
7 F D 2.0530
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Laboratory of Theory of Biopolymers 2018