| Chain sequence(s) |
L: KVSRRGGHQNSYKPY
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 841 | K | L | -1.3758 | |
| 842 | V | L | 1.4235 | |
| 843 | S | L | -0.2306 | |
| 844 | R | L | -2.2211 | |
| 845 | R | L | -2.2498 | |
| 846 | G | L | -0.7925 | |
| 847 | G | L | -0.7119 | |
| 848 | H | L | -1.2937 | |
| 849 | Q | L | -1.6169 | |
| 850 | N | L | -1.5352 | |
| 851 | S | L | -0.2037 | |
| 852 | Y | L | 0.9592 | |
| 853 | K | L | -1.5022 | |
| 854 | P | L | -0.3303 | |
| 855 | Y | L | 1.2689 |