Project name: modlira_agg1

Status: done

Started: 2026-06-26 02:55:11
Settings
Chain sequence(s) A: HAEGTFTSDVSPYLEGQAAKEFIAWLVKGR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-2.6644
Maximal score value
2.071
Average score
-0.1601
Total score value
-4.8039

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 H A -1.4590
2 A A -1.8552
3 E A -2.6644
4 G A -1.6643
5 T A -0.5039
6 F A 0.1286
7 T A 0.0045
8 S A -0.4594
9 D A -0.6614
10 V A 1.1374
11 S A 0.2520
12 P A -0.0599
13 Y A 0.6286
14 L A 0.8713
15 E A -0.8015
16 G A -0.5048
17 Q A -0.8808
18 A A -0.3786
19 A A -0.0554
20 K A -0.9203
21 E A -0.8257
22 F A 1.9161
23 I A 2.0710
24 A A 0.9123
25 W A 1.4447
26 L A 1.4298
27 V A 1.3915
28 K A -0.6338
29 G A -0.9919
30 R A -1.6714
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Laboratory of Theory of Biopolymers 2018