| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2169 | |
| 2 | D | A | -0.0485 | |
| 3 | V | A | 1.6506 | |
| 4 | F | A | 1.9299 | |
| 5 | M | A | 0.8560 | |
| 6 | K | A | -1.0887 | |
| 7 | G | A | -0.7518 | |
| 8 | L | A | -0.4667 | |
| 9 | S | A | -1.5649 | |
| 10 | K | A | -2.6419 | |
| 11 | A | A | -1.6304 | |
| 12 | K | A | -2.2151 | |
| 13 | E | A | -2.2081 | |
| 14 | G | A | -0.9783 | |
| 15 | V | A | 0.5779 | |
| 16 | V | A | 0.4037 | |
| 17 | A | A | -0.7707 | |
| 18 | A | A | -0.8897 | |
| 19 | A | A | -1.2244 | |
| 20 | E | A | -2.7584 | |
| 21 | K | A | -2.9477 | |
| 22 | T | A | -2.3008 | |
| 23 | K | A | -3.2312 | |
| 24 | Q | A | -3.2070 | |
| 25 | G | A | -1.9784 | |
| 26 | V | A | -0.5360 | |
| 27 | A | A | -1.4791 | |
| 28 | E | A | -2.4903 | |
| 29 | A | A | -1.5131 | |
| 30 | A | A | -1.5301 | |
| 31 | G | A | -2.2692 | |
| 32 | K | A | -2.8935 | |
| 33 | T | A | -2.7482 | |
| 34 | K | A | -3.0357 | |
| 35 | E | A | -2.5439 | |
| 36 | G | A | -0.3866 | |
| 37 | V | A | 2.1510 | |
| 38 | L | A | 3.3260 | |
| 39 | Y | A | 3.5779 | |
| 40 | V | A | 3.2694 | |
| 41 | V | A | 1.5205 | |
| 42 | A | A | -0.3778 | |
| 43 | E | A | -2.8931 | |
| 44 | K | A | -3.3544 | |
| 45 | T | A | -2.6279 | |
| 46 | K | A | -3.3492 | |
| 47 | E | A | -3.5539 | |
| 48 | Q | A | -2.5023 | |
| 49 | V | A | -0.2428 | |
| 50 | T | A | -0.8237 | |
| 51 | N | A | -0.9675 | |
| 52 | V | A | 1.1162 | |
| 53 | G | A | 1.0294 | |
| 54 | G | A | 0.9707 | |
| 55 | A | A | 1.7230 | |
| 56 | V | A | 3.0283 | |
| 57 | V | A | 3.2025 | |
| 58 | T | A | 2.0713 | |
| 59 | G | A | 2.1648 | |
| 60 | V | A | 3.0150 | |
| 61 | T | A | 1.5407 | |
| 62 | A | A | 0.9791 | |
| 63 | V | A | 1.7001 | |
| 64 | A | A | 0.5448 | |
| 65 | Q | A | -0.8422 | |
| 66 | K | A | -1.5321 | |
| 67 | T | A | -0.4895 | |
| 68 | V | A | 0.3429 | |
| 69 | E | A | -1.5956 | |
| 70 | G | A | -0.7662 | |
| 71 | A | A | 0.2272 | |
| 72 | G | A | -0.1741 | |
| 73 | S | A | 0.3001 | |
| 74 | I | A | 1.9095 | |
| 75 | A | A | 1.3396 | |
| 76 | A | A | 1.0619 | |
| 77 | A | A | 1.0463 | |
| 78 | T | A | 0.7006 | |
| 79 | G | A | 0.9308 | |
| 80 | F | A | 2.0306 | |
| 81 | V | A | 0.6287 | |
| 82 | K | A | -1.8194 | |
| 83 | K | A | -2.7923 | |
| 84 | D | A | -2.7005 | |
| 85 | Q | A | -2.3233 | |
| 86 | L | A | -0.3867 | |
| 87 | G | A | -1.5937 | |
| 88 | K | A | -3.2122 | |
| 89 | N | A | -3.6302 | |
| 90 | E | A | -4.0262 | |
| 91 | E | A | -3.5497 | |
| 92 | G | A | -2.1214 | |
| 93 | A | A | -1.1457 | |
| 94 | P | A | -1.5913 | |
| 95 | Q | A | -2.3565 | |
| 96 | E | A | -2.2737 | |
| 97 | G | A | -0.4928 | |
| 98 | I | A | 1.5650 | |
| 99 | L | A | 1.1382 | |
| 100 | E | A | -1.2381 | |
| 101 | D | A | -1.1894 | |
| 102 | M | A | 0.3253 | |
| 103 | P | A | 0.1179 | |
| 104 | V | A | 0.4650 | |
| 105 | D | A | -2.0631 | |
| 106 | P | A | -2.0854 | |
| 107 | D | A | -3.4475 | |
| 108 | N | A | -3.4733 | |
| 109 | E | A | -3.2117 | |
| 110 | A | A | -1.3742 | |
| 111 | Y | A | -0.0613 | |
| 112 | E | A | -1.4994 | |
| 113 | M | A | -1.0103 | |
| 114 | P | A | -1.5358 | |
| 115 | S | A | -1.8051 | |
| 116 | E | A | -2.7324 | |
| 117 | E | A | -2.7404 | |
| 118 | G | A | -1.7300 | |
| 119 | Y | A | -0.4588 | |
| 120 | Q | A | -1.6972 | |
| 121 | D | A | -1.8182 | |
| 122 | Y | A | -0.9357 | |
| 123 | E | A | -2.4703 | |
| 124 | P | A | -1.9831 | |
| 125 | E | A | -2.2951 | |
| 126 | A | A | -1.1178 |