| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYYITYGETGASFYFYQTFKVPGSKSTATISGLSPGVDYTITVYAYDWGGYFIGNPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:15)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8320 | |
| 2 | S | A | 0.6827 | |
| 3 | S | A | 0.4078 | |
| 4 | V | A | 0.1491 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5684 | |
| 7 | K | A | -2.4519 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.2833 | |
| 10 | V | A | 0.4178 | |
| 11 | V | A | 1.7085 | |
| 12 | A | A | 0.9722 | |
| 13 | A | A | 0.3126 | |
| 14 | T | A | -0.2039 | |
| 15 | P | A | -0.8138 | |
| 16 | T | A | -0.5356 | |
| 17 | S | A | -0.3172 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.8345 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.7714 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.5919 | |
| 24 | A | A | -1.1769 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.6572 | |
| 27 | V | A | 0.8718 | |
| 28 | T | A | 0.2192 | |
| 29 | V | A | 0.0047 | |
| 30 | D | A | -0.9560 | |
| 31 | Y | A | -0.6681 | |
| 32 | Y | A | 0.0000 | |
| 33 | Y | A | 0.4268 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.2206 | |
| 36 | Y | A | 0.1308 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -0.8997 | |
| 39 | T | A | -0.9576 | |
| 40 | G | A | -0.5410 | |
| 41 | A | A | 0.6069 | |
| 42 | S | A | 1.7138 | |
| 43 | F | A | 2.9383 | |
| 44 | Y | A | 3.0701 | |
| 45 | F | A | 2.9152 | |
| 46 | Y | A | 1.5334 | |
| 47 | Q | A | -0.0613 | |
| 48 | T | A | -0.3331 | |
| 49 | F | A | -0.4318 | |
| 50 | K | A | -1.2012 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2789 | |
| 53 | G | A | -1.2219 | |
| 54 | S | A | -1.3030 | |
| 55 | K | A | -2.1827 | |
| 56 | S | A | -1.4293 | |
| 57 | T | A | -0.7039 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2377 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.4782 | |
| 62 | G | A | -0.6875 | |
| 63 | L | A | 0.0000 | |
| 64 | S | A | -0.8769 | |
| 65 | P | A | -0.9992 | |
| 66 | G | A | -1.1029 | |
| 67 | V | A | -0.9885 | |
| 68 | D | A | -1.9113 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.0028 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.7455 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 1.0860 | |
| 77 | D | A | 0.5941 | |
| 78 | W | A | 0.7811 | |
| 79 | G | A | 0.3342 | |
| 80 | G | A | 0.7305 | |
| 81 | Y | A | 1.9726 | |
| 82 | F | A | 2.5241 | |
| 83 | I | A | 1.2766 | |
| 84 | G | A | 0.1628 | |
| 85 | N | A | -0.8419 | |
| 86 | P | A | -0.0422 | |
| 87 | I | A | -0.1199 | |
| 88 | S | A | -0.5149 | |
| 89 | I | A | -0.5965 | |
| 90 | N | A | -1.7050 | |
| 91 | Y | A | -1.4414 | |
| 92 | R | A | -2.3893 | |
| 93 | T | A | -1.2029 |