Project name: query_structure

Status: done

Started: 2026-03-16 21:43:52
Settings
Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIAYWEPGIGGEAIWLAVPGSERSYDLTGLKPGTEYKVWIHGVKGGASSPPLIARFTT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-3.0707
Maximal score value
1.4577
Average score
-0.6547
Total score value
-58.9198

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0627
2 L A 0.4594
3 P A -0.2127
4 A A -0.5060
5 P A 0.0000
6 K A -2.0712
7 N A -1.3003
8 L A 0.1639
9 V A 0.8949
10 V A 0.0447
11 S A -0.5964
12 R A -1.9958
13 V A -1.0196
14 T A -1.8011
15 E A -3.0707
16 D A -2.7815
17 S A -2.0737
18 A A 0.0000
19 R A -1.1590
20 L A 0.0000
21 S A -0.3739
22 W A 0.0000
23 T A -1.3380
24 A A 0.0000
25 P A -1.4151
26 D A -2.2852
27 A A -1.4189
28 A A -1.1562
29 F A 0.0000
30 D A -2.3942
31 S A -1.4310
32 F A 0.0000
33 N A 0.1652
34 I A 0.0000
35 A A 0.0000
36 Y A 0.4388
37 W A -0.2662
38 E A -0.9823
39 P A -0.7646
40 G A 0.0535
41 I A 1.0862
42 G A -0.1551
43 G A -0.5111
44 E A -1.3477
45 A A -0.1729
46 I A 0.9559
47 W A 1.4577
48 L A 1.0415
49 A A 0.3194
50 V A 0.0000
51 P A -1.1488
52 G A 0.0000
53 S A -1.6646
54 E A -1.6249
55 R A -1.2024
56 S A -0.6645
57 Y A -0.7015
58 D A -1.5446
59 L A 0.0000
60 T A -1.3286
61 G A -1.5108
62 L A 0.0000
63 K A -3.0707
64 P A -2.6569
65 G A -1.9488
66 T A -2.0779
67 E A -2.3163
68 Y A 0.0000
69 K A -1.0286
70 V A 0.0000
71 W A 1.0090
72 I A 0.0000
73 H A -0.1034
74 G A 0.0000
75 V A -0.8933
76 K A -1.5780
77 G A -1.3432
78 G A -1.0753
79 A A -0.5166
80 S A -0.2396
81 S A 0.0000
82 P A 0.2291
83 P A 0.1854
84 L A 0.6756
85 I A 1.1351
86 A A 0.0584
87 R A -1.7376
88 F A 0.0000
89 T A -1.7671
90 T A -2.0118
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Laboratory of Theory of Biopolymers 2018