| Chain sequence(s) |
A: GHKGHKS
C: GHKGHKS B: GHKGHKS E: GHKGHKS D: GHKGHKS G: GHKGHKS F: GHKGHKS I: GHKGHKS H: GHKGHKS K: GHKGHKS J: GHKGHKS M: GHKGHKS L: GHKGHKS O: GHKGHKS N: GHKGHKS Q: GHKGHKS P: GHKGHKS S: GHKGHKS R: GHKGHKS T: GHKGHKS input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:31)
[INFO] Main: Simulation completed successfully. (00:07:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.4637 | |
| 2 | H | A | -3.5522 | |
| 3 | K | A | -3.2493 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -3.0789 | |
| 6 | K | A | -3.1366 | |
| 7 | S | A | -1.7706 | |
| 1 | G | B | -2.7364 | |
| 2 | H | B | -3.2698 | |
| 3 | K | B | -3.3576 | |
| 4 | G | B | -2.9632 | |
| 5 | H | B | -2.7348 | |
| 6 | K | B | -2.9392 | |
| 7 | S | B | -1.3370 | |
| 1 | G | C | -2.1195 | |
| 2 | H | C | -3.1539 | |
| 3 | K | C | -3.3761 | |
| 4 | G | C | -2.7462 | |
| 5 | H | C | -3.4015 | |
| 6 | K | C | -3.2043 | |
| 7 | S | C | -1.9750 | |
| 1 | G | D | -2.3595 | |
| 2 | H | D | -2.7498 | |
| 3 | K | D | -3.4617 | |
| 4 | G | D | -2.8796 | |
| 5 | H | D | -2.8360 | |
| 6 | K | D | -2.7424 | |
| 7 | S | D | -1.4282 | |
| 1 | G | E | -2.1917 | |
| 2 | H | E | -2.9121 | |
| 3 | K | E | -3.6545 | |
| 4 | G | E | -3.2414 | |
| 5 | H | E | -2.6097 | |
| 6 | K | E | -3.1069 | |
| 7 | S | E | -1.5832 | |
| 1 | G | F | -2.3091 | |
| 2 | H | F | -2.8959 | |
| 3 | K | F | -3.0218 | |
| 4 | G | F | -2.6968 | |
| 5 | H | F | -2.3965 | |
| 6 | K | F | -2.7461 | |
| 7 | S | F | -1.3993 | |
| 1 | G | G | -1.5668 | |
| 2 | H | G | -2.3188 | |
| 3 | K | G | -2.9443 | |
| 4 | G | G | -2.5307 | |
| 5 | H | G | -2.5972 | |
| 6 | K | G | -2.6370 | |
| 7 | S | G | -1.2843 | |
| 1 | G | H | -1.5929 | |
| 2 | H | H | -2.2927 | |
| 3 | K | H | -3.1760 | |
| 4 | G | H | -2.3630 | |
| 5 | H | H | -2.4403 | |
| 6 | K | H | -2.5608 | |
| 7 | S | H | -1.1507 | |
| 1 | G | I | -1.9542 | |
| 2 | H | I | -2.7298 | |
| 3 | K | I | -2.9941 | |
| 4 | G | I | -2.5709 | |
| 5 | H | I | -2.5556 | |
| 6 | K | I | -2.5687 | |
| 7 | S | I | -1.3523 | |
| 1 | G | J | -1.9555 | |
| 2 | H | J | -2.5782 | |
| 3 | K | J | -2.8135 | |
| 4 | G | J | -2.2944 | |
| 5 | H | J | -2.3800 | |
| 6 | K | J | -2.6764 | |
| 7 | S | J | -1.7886 | |
| 1 | G | K | -2.4737 | |
| 2 | H | K | -3.0694 | |
| 3 | K | K | -4.0125 | |
| 4 | G | K | -3.1693 | |
| 5 | H | K | -2.9006 | |
| 6 | K | K | -2.9423 | |
| 7 | S | K | -1.4744 | |
| 1 | G | L | -1.7806 | |
| 2 | H | L | -2.5005 | |
| 3 | K | L | -3.8406 | |
| 4 | G | L | -2.9025 | |
| 5 | H | L | -2.5072 | |
| 6 | K | L | -2.4987 | |
| 7 | S | L | -1.0606 | |
| 1 | G | M | -2.0832 | |
| 2 | H | M | -3.2159 | |
| 3 | K | M | -3.5595 | |
| 4 | G | M | -2.8007 | |
| 5 | H | M | -2.5972 | |
| 6 | K | M | -2.6090 | |
| 7 | S | M | -1.2947 | |
| 1 | G | N | -2.8557 | |
| 2 | H | N | -3.7984 | |
| 3 | K | N | -3.7883 | |
| 4 | G | N | -3.8336 | |
| 5 | H | N | -3.4348 | |
| 6 | K | N | -3.0408 | |
| 7 | S | N | -1.7522 | |
| 1 | G | O | -1.9288 | |
| 2 | H | O | -2.4368 | |
| 3 | K | O | -2.9347 | |
| 4 | G | O | -2.4828 | |
| 5 | H | O | -2.5769 | |
| 6 | K | O | -2.5905 | |
| 7 | S | O | -1.3270 | |
| 1 | G | P | -2.7051 | |
| 2 | H | P | -3.7099 | |
| 3 | K | P | -3.5111 | |
| 4 | G | P | -2.5580 | |
| 5 | H | P | -3.1172 | |
| 6 | K | P | -2.7568 | |
| 7 | S | P | -1.2775 | |
| 1 | G | Q | -2.1961 | |
| 2 | H | Q | -2.6782 | |
| 3 | K | Q | -2.8172 | |
| 4 | G | Q | -2.3360 | |
| 5 | H | Q | -2.5495 | |
| 6 | K | Q | -2.4136 | |
| 7 | S | Q | -1.1973 | |
| 1 | G | R | -2.7022 | |
| 2 | H | R | -2.4865 | |
| 3 | K | R | -2.6563 | |
| 4 | G | R | -2.4342 | |
| 5 | H | R | -2.6811 | |
| 6 | K | R | -2.9590 | |
| 7 | S | R | -1.5827 | |
| 1 | G | S | -2.2998 | |
| 2 | H | S | -2.6363 | |
| 3 | K | S | -2.9783 | |
| 4 | G | S | -2.4034 | |
| 5 | H | S | -2.4335 | |
| 6 | K | S | -2.5801 | |
| 7 | S | S | -1.2402 | |
| 1 | G | T | -1.8767 | |
| 2 | H | T | -2.3805 | |
| 3 | K | T | -3.0121 | |
| 4 | G | T | -2.6857 | |
| 5 | H | T | -2.9377 | |
| 6 | K | T | -2.9728 | |
| 7 | S | T | -1.7560 |