| Chain sequence(s) |
A: CAKKRNWCGKTEDCCCPMKCVYAWYNEQGSCQSTISALWKKC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.5728 | |
| 2 | A | A | -1.6605 | |
| 3 | K | A | -2.7350 | |
| 4 | K | A | -2.8127 | |
| 5 | R | A | -2.7607 | |
| 6 | N | A | -1.9151 | |
| 7 | W | A | -0.3245 | |
| 8 | C | A | -1.2706 | |
| 9 | G | A | -2.1016 | |
| 10 | K | A | -2.7642 | |
| 11 | T | A | -2.3503 | |
| 12 | E | A | -2.9756 | |
| 13 | D | A | -2.9347 | |
| 14 | C | A | 0.0000 | |
| 15 | C | A | -0.5714 | |
| 16 | C | A | -0.4525 | |
| 17 | P | A | 0.0293 | |
| 18 | M | A | -1.0912 | |
| 19 | K | A | -0.9520 | |
| 20 | C | A | -0.6372 | |
| 21 | V | A | 0.4005 | |
| 22 | Y | A | 1.2697 | |
| 23 | A | A | 1.0524 | |
| 24 | W | A | 1.4607 | |
| 25 | Y | A | 1.2893 | |
| 26 | N | A | -0.1342 | |
| 27 | E | A | -1.2682 | |
| 28 | Q | A | -1.2653 | |
| 29 | G | A | 0.0000 | |
| 30 | S | A | 0.0000 | |
| 31 | C | A | 0.0000 | |
| 32 | Q | A | -1.3648 | |
| 33 | S | A | -0.1847 | |
| 34 | T | A | 0.7340 | |
| 35 | I | A | 2.0331 | |
| 36 | S | A | 1.0721 | |
| 37 | A | A | 0.0000 | |
| 38 | L | A | 1.5108 | |
| 39 | W | A | 1.0408 | |
| 40 | K | A | -0.7745 | |
| 41 | K | A | -0.8820 | |
| 42 | C | A | 0.0338 |