| Chain sequence(s) |
A: SMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETYYATSYLEYEIENFGAQHSTTLFKIDNNTFVRLDRPHTPQFLFQLNDTIHLHQQLSNTTGRLIYTLDANINADIGE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | YA275A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 2.33262 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:14)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:22)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:31)
[INFO] Main: Simulation completed successfully. (00:02:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 32 | S | A | -0.1832 | |
| 33 | M | A | 0.6869 | |
| 34 | P | A | 0.7722 | |
| 35 | L | A | 0.0000 | |
| 36 | G | A | 0.8407 | |
| 37 | V | A | 0.0000 | |
| 38 | V | A | -0.1965 | |
| 39 | T | A | -1.1027 | |
| 40 | N | A | -1.7189 | |
| 41 | S | A | -0.9442 | |
| 42 | T | A | -0.1487 | |
| 43 | L | A | 0.9032 | |
| 44 | E | A | -0.1648 | |
| 45 | V | A | 1.1447 | |
| 46 | T | A | 0.2928 | |
| 47 | E | A | -0.1542 | |
| 48 | I | A | 0.8277 | |
| 49 | D | A | -1.2120 | |
| 50 | Q | A | -0.8992 | |
| 51 | L | A | 0.7179 | |
| 52 | V | A | 1.5660 | |
| 53 | C | A | 0.3567 | |
| 54 | K | A | -1.6110 | |
| 55 | D | A | -1.6426 | |
| 56 | H | A | -1.6379 | |
| 57 | L | A | -0.1981 | |
| 58 | A | A | -0.3297 | |
| 59 | S | A | -0.4800 | |
| 60 | T | A | -0.5625 | |
| 61 | D | A | -1.6188 | |
| 62 | Q | A | 0.0000 | |
| 63 | L | A | 0.3200 | |
| 64 | K | A | -0.4719 | |
| 65 | S | A | -0.2672 | |
| 66 | V | A | -0.2410 | |
| 67 | G | A | 0.0000 | |
| 68 | L | A | 0.4973 | |
| 69 | N | A | 0.0000 | |
| 70 | L | A | 0.1322 | |
| 71 | E | A | -1.0990 | |
| 72 | G | A | -1.2990 | |
| 73 | S | A | -0.5958 | |
| 74 | G | A | -0.8091 | |
| 75 | V | A | -0.2420 | |
| 76 | S | A | -0.4468 | |
| 77 | T | A | -0.9374 | |
| 78 | D | A | -0.5954 | |
| 79 | I | A | 0.0000 | |
| 80 | P | A | -1.0241 | |
| 81 | S | A | -0.9328 | |
| 82 | A | A | 0.0000 | |
| 83 | T | A | 0.0000 | |
| 84 | K | A | -1.9765 | |
| 85 | R | A | -1.7991 | |
| 86 | W | A | 0.0000 | |
| 87 | G | A | -1.1761 | |
| 88 | F | A | -1.3257 | |
| 89 | R | A | -2.3118 | |
| 90 | S | A | -1.7404 | |
| 91 | G | A | -1.0665 | |
| 92 | V | A | -0.7009 | |
| 93 | P | A | -0.9053 | |
| 94 | P | A | -0.6604 | |
| 95 | K | A | -0.5739 | |
| 96 | V | A | 0.9733 | |
| 97 | V | A | 1.1558 | |
| 98 | S | A | -0.2030 | |
| 99 | Y | A | 0.0000 | |
| 100 | E | A | -2.3194 | |
| 101 | A | A | -1.5721 | |
| 102 | G | A | -1.4096 | |
| 103 | E | A | -1.4387 | |
| 104 | W | A | -0.9945 | |
| 105 | A | A | 0.0000 | |
| 106 | E | A | -2.3687 | |
| 107 | N | A | 0.0000 | |
| 108 | C | A | 0.0000 | |
| 109 | Y | A | 0.0000 | |
| 110 | N | A | -1.1614 | |
| 111 | L | A | 0.0000 | |
| 112 | E | A | -2.8350 | |
| 113 | I | A | 0.0000 | |
| 114 | K | A | -2.6430 | |
| 115 | K | A | -2.1546 | |
| 116 | P | A | -1.8523 | |
| 117 | D | A | -2.6036 | |
| 118 | G | A | -1.9780 | |
| 119 | S | A | -1.8302 | |
| 120 | E | A | -2.2686 | |
| 121 | C | A | -1.5319 | |
| 122 | L | A | 0.0000 | |
| 123 | P | A | -0.8439 | |
| 124 | P | A | -1.0149 | |
| 125 | P | A | -1.3072 | |
| 126 | P | A | -1.5332 | |
| 127 | D | A | -2.3702 | |
| 128 | G | A | -1.9165 | |
| 129 | V | A | 0.0000 | |
| 130 | R | A | -2.6834 | |
| 131 | G | A | -1.7238 | |
| 132 | F | A | 0.0000 | |
| 133 | P | A | -1.5728 | |
| 134 | R | A | -1.6974 | |
| 135 | C | A | 0.0000 | |
| 136 | R | A | -1.2137 | |
| 137 | Y | A | -0.7723 | |
| 138 | V | A | 0.0000 | |
| 139 | H | A | 0.0000 | |
| 140 | K | A | -1.6149 | |
| 141 | A | A | 0.0000 | |
| 142 | Q | A | -2.7539 | |
| 143 | G | A | 0.0000 | |
| 144 | T | A | -2.1238 | |
| 145 | G | A | 0.0000 | |
| 146 | P | A | -1.1433 | |
| 147 | C | A | 0.0000 | |
| 148 | P | A | -1.1369 | |
| 149 | G | A | -1.8969 | |
| 150 | D | A | -2.2405 | |
| 151 | Y | A | -1.0474 | |
| 152 | A | A | 0.0000 | |
| 153 | F | A | -0.9141 | |
| 154 | H | A | 0.0000 | |
| 155 | K | A | -2.8837 | |
| 156 | D | A | -2.7981 | |
| 157 | G | A | -1.6927 | |
| 158 | A | A | -0.5814 | |
| 159 | F | A | 0.3676 | |
| 160 | F | A | 0.0000 | |
| 161 | L | A | 0.0000 | |
| 162 | Y | A | 0.0000 | |
| 163 | D | A | -2.2434 | |
| 164 | R | A | -2.5525 | |
| 165 | L | A | -0.7323 | |
| 166 | A | A | 0.0000 | |
| 167 | S | A | 0.0000 | |
| 168 | T | A | 0.1678 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 0.0000 | |
| 171 | Y | A | 0.0000 | |
| 172 | R | A | -1.3737 | |
| 173 | G | A | -1.5229 | |
| 174 | V | A | 0.0000 | |
| 175 | N | A | -1.0606 | |
| 176 | F | A | 0.0000 | |
| 177 | A | A | 0.0000 | |
| 178 | E | A | 0.0000 | |
| 179 | G | A | 0.0000 | |
| 180 | V | A | 1.1712 | |
| 181 | I | A | 1.0555 | |
| 182 | A | A | 0.9520 | |
| 183 | F | A | 1.3527 | |
| 184 | L | A | 1.0157 | |
| 185 | I | A | 0.0000 | |
| 186 | L | A | -0.9705 | |
| 187 | A | A | -1.5684 | |
| 188 | K | A | -2.6632 | |
| 189 | P | A | -2.6342 | |
| 190 | K | A | -3.4064 | |
| 191 | E | A | -3.0904 | |
| 192 | T | A | -1.6965 | |
| 212 | Y | A | 1.7082 | |
| 213 | Y | A | 1.6571 | |
| 214 | A | A | 0.5835 | |
| 215 | T | A | -0.2120 | |
| 216 | S | A | 0.4415 | |
| 217 | Y | A | 0.8043 | |
| 218 | L | A | 0.0000 | |
| 219 | E | A | -1.2010 | |
| 220 | Y | A | 0.0000 | |
| 221 | E | A | -2.3002 | |
| 222 | I | A | 0.0000 | |
| 223 | E | A | -2.6454 | |
| 224 | N | A | -2.0333 | |
| 225 | F | A | -1.4274 | |
| 226 | G | A | -1.2149 | |
| 227 | A | A | -1.5611 | |
| 228 | Q | A | -2.1101 | |
| 229 | H | A | -2.0915 | |
| 230 | S | A | -1.9626 | |
| 231 | T | A | -1.8604 | |
| 232 | T | A | 0.0000 | |
| 233 | L | A | -1.2070 | |
| 234 | F | A | 0.0000 | |
| 235 | K | A | -1.0211 | |
| 236 | I | A | -0.6575 | |
| 237 | D | A | -1.2616 | |
| 238 | N | A | -1.7033 | |
| 239 | N | A | -1.5215 | |
| 240 | T | A | 0.0000 | |
| 241 | F | A | -0.3034 | |
| 242 | V | A | 0.0000 | |
| 243 | R | A | -1.8784 | |
| 244 | L | A | -1.8877 | |
| 245 | D | A | -2.7082 | |
| 246 | R | A | -2.5306 | |
| 247 | P | A | -1.6114 | |
| 248 | H | A | -1.3702 | |
| 249 | T | A | -0.7883 | |
| 250 | P | A | 0.0000 | |
| 251 | Q | A | -0.4850 | |
| 252 | F | A | 0.0775 | |
| 253 | L | A | 0.0000 | |
| 254 | F | A | -0.0110 | |
| 255 | Q | A | -1.2483 | |
| 256 | L | A | -0.7775 | |
| 257 | N | A | -1.1337 | |
| 258 | D | A | -1.9667 | |
| 259 | T | A | -1.1711 | |
| 260 | I | A | -1.1218 | |
| 261 | H | A | -1.0467 | |
| 262 | L | A | 0.0509 | |
| 263 | H | A | -1.2508 | |
| 264 | Q | A | -1.4850 | |
| 265 | Q | A | -1.0185 | |
| 266 | L | A | -1.0151 | |
| 267 | S | A | -1.4531 | |
| 268 | N | A | -1.9203 | |
| 269 | T | A | -1.1122 | |
| 270 | T | A | -0.8400 | |
| 271 | G | A | -0.8494 | |
| 272 | R | A | -0.9028 | |
| 273 | L | A | 0.2926 | |
| 274 | I | A | 0.5874 | |
| 275 | A | A | 0.1168 | mutated: YA275A |
| 276 | T | A | 0.0041 | |
| 277 | L | A | 0.0383 | |
| 278 | D | A | -1.1541 | |
| 279 | A | A | -1.0502 | |
| 280 | N | A | -1.3917 | |
| 281 | I | A | -1.2940 | |
| 282 | N | A | -1.6087 | |
| 283 | A | A | -1.3703 | |
| 284 | D | A | -1.3572 | |
| 285 | I | A | 0.3394 | |
| 286 | G | A | -1.0082 | |
| 287 | E | A | -2.0902 |