| Chain sequence(s) |
A: GGGHKFF
C: GGGHKFF B: GGGHKFF E: GGGHKFF D: GGGHKFF G: GGGHKFF F: GGGHKFF I: GGGHKFF H: GGGHKFF K: GGGHKFF J: GGGHKFF M: GGGHKFF L: GGGHKFF O: GGGHKFF N: GGGHKFF Q: GGGHKFF P: GGGHKFF S: GGGHKFF R: GGGHKFF T: GGGHKFF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:30)
[INFO] Main: Simulation completed successfully. (00:03:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.0275 | |
| 2 | G | A | -2.2177 | |
| 3 | G | A | -2.1283 | |
| 4 | H | A | -1.8536 | |
| 5 | K | A | -1.0014 | |
| 6 | F | A | 1.9286 | |
| 7 | F | A | 2.6177 | |
| 1 | G | B | -1.9457 | |
| 2 | G | B | -2.1793 | |
| 3 | G | B | -2.4258 | |
| 4 | H | B | -1.7042 | |
| 5 | K | B | -1.0796 | |
| 6 | F | B | 1.7699 | |
| 7 | F | B | 2.9124 | |
| 1 | G | C | -2.0333 | |
| 2 | G | C | -1.8347 | |
| 3 | G | C | -2.0294 | |
| 4 | H | C | -1.3159 | |
| 5 | K | C | -0.8831 | |
| 6 | F | C | 1.3492 | |
| 7 | F | C | 2.6736 | |
| 1 | G | D | -1.4781 | |
| 2 | G | D | -1.6497 | |
| 3 | G | D | -2.0304 | |
| 4 | H | D | -1.7071 | |
| 5 | K | D | -1.2525 | |
| 6 | F | D | 0.9863 | |
| 7 | F | D | 2.5284 | |
| 1 | G | E | -1.6726 | |
| 2 | G | E | -1.8316 | |
| 3 | G | E | -1.7191 | |
| 4 | H | E | -1.1088 | |
| 5 | K | E | -0.5294 | |
| 6 | F | E | 2.1227 | |
| 7 | F | E | 2.9803 | |
| 1 | G | F | -1.6144 | |
| 2 | G | F | -1.7168 | |
| 3 | G | F | -1.4282 | |
| 4 | H | F | -0.6705 | |
| 5 | K | F | 0.3000 | |
| 6 | F | F | 2.9170 | |
| 7 | F | F | 3.1445 | |
| 1 | G | G | -1.7987 | |
| 2 | G | G | -1.5973 | |
| 3 | G | G | -1.4351 | |
| 4 | H | G | -0.5099 | |
| 5 | K | G | 1.1121 | |
| 6 | F | G | 3.2292 | |
| 7 | F | G | 3.6829 | |
| 1 | G | H | -1.2890 | |
| 2 | G | H | -1.6200 | |
| 3 | G | H | -1.4376 | |
| 4 | H | H | -1.1810 | |
| 5 | K | H | 0.0026 | |
| 6 | F | H | 2.1482 | |
| 7 | F | H | 3.0454 | |
| 1 | G | I | -1.8029 | |
| 2 | G | I | -1.7304 | |
| 3 | G | I | -1.2384 | |
| 4 | H | I | -0.9833 | |
| 5 | K | I | 0.1342 | |
| 6 | F | I | 1.6156 | |
| 7 | F | I | 2.6943 | |
| 1 | G | J | -1.7881 | |
| 2 | G | J | -1.9222 | |
| 3 | G | J | -1.7337 | |
| 4 | H | J | -1.6448 | |
| 5 | K | J | -0.8943 | |
| 6 | F | J | 1.1037 | |
| 7 | F | J | 2.3559 | |
| 1 | G | K | -1.9150 | |
| 2 | G | K | -2.0082 | |
| 3 | G | K | -1.6198 | |
| 4 | H | K | -1.3432 | |
| 5 | K | K | -0.5776 | |
| 6 | F | K | 1.5656 | |
| 7 | F | K | 2.5619 | |
| 1 | G | L | -1.9537 | |
| 2 | G | L | -1.8329 | |
| 3 | G | L | -1.5082 | |
| 4 | H | L | -1.1681 | |
| 5 | K | L | -0.1298 | |
| 6 | F | L | 1.8472 | |
| 7 | F | L | 2.8581 | |
| 1 | G | M | -1.6514 | |
| 2 | G | M | -1.5858 | |
| 3 | G | M | -0.8990 | |
| 4 | H | M | -0.6677 | |
| 5 | K | M | -0.1202 | |
| 6 | F | M | 2.6184 | |
| 7 | F | M | 2.8210 | |
| 1 | G | N | -1.7237 | |
| 2 | G | N | -1.8603 | |
| 3 | G | N | -1.0591 | |
| 4 | H | N | -0.7145 | |
| 5 | K | N | -0.1482 | |
| 6 | F | N | 2.3687 | |
| 7 | F | N | 3.0571 | |
| 1 | G | O | -1.2934 | |
| 2 | G | O | -1.3899 | |
| 3 | G | O | -1.6209 | |
| 4 | H | O | -1.3156 | |
| 5 | K | O | -0.3581 | |
| 6 | F | O | 1.5616 | |
| 7 | F | O | 2.8977 | |
| 1 | G | P | -1.2235 | |
| 2 | G | P | -1.7212 | |
| 3 | G | P | -1.8972 | |
| 4 | H | P | -1.5491 | |
| 5 | K | P | -1.1036 | |
| 6 | F | P | 1.2057 | |
| 7 | F | P | 2.4001 | |
| 1 | G | Q | -1.0439 | |
| 2 | G | Q | -0.9520 | |
| 3 | G | Q | -1.8523 | |
| 4 | H | Q | -1.9244 | |
| 5 | K | Q | -1.6998 | |
| 6 | F | Q | 1.0825 | |
| 7 | F | Q | 2.3670 | |
| 1 | G | R | -1.5733 | |
| 2 | G | R | -1.8088 | |
| 3 | G | R | -1.9210 | |
| 4 | H | R | -0.9338 | |
| 5 | K | R | -0.1951 | |
| 6 | F | R | 2.7433 | |
| 7 | F | R | 3.3840 | |
| 1 | G | S | -2.0214 | |
| 2 | G | S | -1.9115 | |
| 3 | G | S | -2.1523 | |
| 4 | H | S | -1.4015 | |
| 5 | K | S | -0.2980 | |
| 6 | F | S | 2.6762 | |
| 7 | F | S | 3.1869 | |
| 1 | G | T | -1.7140 | |
| 2 | G | T | -1.9791 | |
| 3 | G | T | -1.7412 | |
| 4 | H | T | -1.0419 | |
| 5 | K | T | -0.4977 | |
| 6 | F | T | 2.2851 | |
| 7 | F | T | 2.8000 |