Project name: GGGHKFF20

Status: done

Started: 2026-02-23 07:15:44
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Chain sequence(s) A: GGGHKFF
C: GGGHKFF
B: GGGHKFF
E: GGGHKFF
D: GGGHKFF
G: GGGHKFF
F: GGGHKFF
I: GGGHKFF
H: GGGHKFF
K: GGGHKFF
J: GGGHKFF
M: GGGHKFF
L: GGGHKFF
O: GGGHKFF
N: GGGHKFF
Q: GGGHKFF
P: GGGHKFF
S: GGGHKFF
R: GGGHKFF
T: GGGHKFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:35)
Show buried residues

Minimal score value
-2.4258
Maximal score value
3.6829
Average score
-0.2904
Total score value
-40.6545

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -2.0275
2 G A -2.2177
3 G A -2.1283
4 H A -1.8536
5 K A -1.0014
6 F A 1.9286
7 F A 2.6177
1 G B -1.9457
2 G B -2.1793
3 G B -2.4258
4 H B -1.7042
5 K B -1.0796
6 F B 1.7699
7 F B 2.9124
1 G C -2.0333
2 G C -1.8347
3 G C -2.0294
4 H C -1.3159
5 K C -0.8831
6 F C 1.3492
7 F C 2.6736
1 G D -1.4781
2 G D -1.6497
3 G D -2.0304
4 H D -1.7071
5 K D -1.2525
6 F D 0.9863
7 F D 2.5284
1 G E -1.6726
2 G E -1.8316
3 G E -1.7191
4 H E -1.1088
5 K E -0.5294
6 F E 2.1227
7 F E 2.9803
1 G F -1.6144
2 G F -1.7168
3 G F -1.4282
4 H F -0.6705
5 K F 0.3000
6 F F 2.9170
7 F F 3.1445
1 G G -1.7987
2 G G -1.5973
3 G G -1.4351
4 H G -0.5099
5 K G 1.1121
6 F G 3.2292
7 F G 3.6829
1 G H -1.2890
2 G H -1.6200
3 G H -1.4376
4 H H -1.1810
5 K H 0.0026
6 F H 2.1482
7 F H 3.0454
1 G I -1.8029
2 G I -1.7304
3 G I -1.2384
4 H I -0.9833
5 K I 0.1342
6 F I 1.6156
7 F I 2.6943
1 G J -1.7881
2 G J -1.9222
3 G J -1.7337
4 H J -1.6448
5 K J -0.8943
6 F J 1.1037
7 F J 2.3559
1 G K -1.9150
2 G K -2.0082
3 G K -1.6198
4 H K -1.3432
5 K K -0.5776
6 F K 1.5656
7 F K 2.5619
1 G L -1.9537
2 G L -1.8329
3 G L -1.5082
4 H L -1.1681
5 K L -0.1298
6 F L 1.8472
7 F L 2.8581
1 G M -1.6514
2 G M -1.5858
3 G M -0.8990
4 H M -0.6677
5 K M -0.1202
6 F M 2.6184
7 F M 2.8210
1 G N -1.7237
2 G N -1.8603
3 G N -1.0591
4 H N -0.7145
5 K N -0.1482
6 F N 2.3687
7 F N 3.0571
1 G O -1.2934
2 G O -1.3899
3 G O -1.6209
4 H O -1.3156
5 K O -0.3581
6 F O 1.5616
7 F O 2.8977
1 G P -1.2235
2 G P -1.7212
3 G P -1.8972
4 H P -1.5491
5 K P -1.1036
6 F P 1.2057
7 F P 2.4001
1 G Q -1.0439
2 G Q -0.9520
3 G Q -1.8523
4 H Q -1.9244
5 K Q -1.6998
6 F Q 1.0825
7 F Q 2.3670
1 G R -1.5733
2 G R -1.8088
3 G R -1.9210
4 H R -0.9338
5 K R -0.1951
6 F R 2.7433
7 F R 3.3840
1 G S -2.0214
2 G S -1.9115
3 G S -2.1523
4 H S -1.4015
5 K S -0.2980
6 F S 2.6762
7 F S 3.1869
1 G T -1.7140
2 G T -1.9791
3 G T -1.7412
4 H T -1.0419
5 K T -0.4977
6 F T 2.2851
7 F T 2.8000
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Laboratory of Theory of Biopolymers 2018