| Chain sequence(s) |
B: ASAAALAAARAAGGEAGAAALEAWDAASGGDGGPVKDKAAKDAAWAALAPTLAAARALGLGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.9197 | |
| 2 | S | B | -0.5857 | |
| 3 | A | B | 0.1056 | |
| 4 | A | B | -0.1726 | |
| 5 | A | B | -0.4874 | |
| 6 | L | B | -0.7700 | |
| 7 | A | B | -0.6008 | |
| 8 | A | B | 0.0000 | |
| 9 | A | B | 0.0000 | |
| 10 | R | B | -2.2028 | |
| 11 | A | B | -0.7746 | |
| 12 | A | B | -0.7516 | |
| 13 | G | B | -1.2458 | |
| 14 | G | B | -1.8383 | |
| 15 | E | B | -2.3799 | |
| 16 | A | B | -1.3977 | |
| 17 | G | B | 0.0000 | |
| 18 | A | B | 0.0000 | |
| 19 | A | B | -1.2815 | |
| 20 | A | B | 0.0000 | |
| 21 | L | B | 0.0000 | |
| 22 | E | B | -1.7901 | |
| 23 | A | B | -0.7560 | |
| 24 | W | B | -0.7456 | |
| 25 | D | B | -1.4699 | |
| 26 | A | B | -1.2854 | |
| 27 | A | B | 0.0000 | |
| 28 | S | B | -1.8756 | |
| 29 | G | B | -1.4424 | |
| 30 | G | B | -1.7396 | |
| 31 | D | B | -2.2985 | |
| 32 | G | B | -1.5103 | |
| 33 | G | B | -1.2976 | |
| 34 | P | B | -1.0287 | |
| 35 | V | B | -1.3134 | |
| 36 | K | B | -2.6516 | |
| 37 | D | B | -3.1349 | |
| 38 | K | B | -3.1408 | |
| 39 | A | B | -1.9259 | |
| 40 | A | B | -1.6314 | |
| 41 | K | B | -2.0353 | |
| 42 | D | B | -2.1900 | |
| 43 | A | B | -0.7968 | |
| 44 | A | B | 0.0000 | |
| 45 | W | B | 0.1312 | |
| 46 | A | B | -0.0257 | |
| 47 | A | B | 0.0837 | |
| 48 | L | B | 0.0000 | |
| 49 | A | B | 0.1762 | |
| 50 | P | B | -0.3198 | |
| 51 | T | B | 0.0000 | |
| 52 | L | B | 0.0000 | |
| 53 | A | B | -0.4823 | |
| 54 | A | B | -0.2155 | |
| 55 | A | B | 0.0000 | |
| 56 | R | B | -1.5146 | |
| 57 | A | B | -0.1346 | |
| 58 | L | B | 0.8382 | |
| 59 | G | B | -0.2884 | |
| 60 | L | B | -0.1349 | |
| 61 | G | B | -0.7076 | |
| 62 | S | B | -0.9267 | |
| 63 | G | B | -0.8247 | |
| 64 | C | B | 0.0000 |