Project name: query_structure

Status: done

Started: 2026-03-17 01:12:45
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGWTWVLRESKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:47)
Show buried residues

Minimal score value
-3.4263
Maximal score value
1.9994
Average score
-0.7055
Total score value
-66.3147

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6251
2 S A 0.0602
3 D A -1.0026
4 V A -1.3391
5 P A 0.0000
6 R A -3.2760
7 D A -3.4263
8 L A -2.1791
9 E A -2.0581
10 V A 0.1128
11 V A 1.5455
12 A A 0.8805
13 A A 0.2759
14 T A -0.5437
15 P A -1.1405
16 T A -1.0053
17 S A -0.5463
18 L A 0.0000
19 L A 0.7062
20 I A 0.0000
21 S A -1.1092
22 W A 0.0000
23 D A -3.2692
24 A A -1.6870
25 P A 0.0000
26 A A 0.1278
27 V A 0.3320
28 T A -0.2511
29 V A -1.1834
30 R A -1.8395
31 Y A -1.3050
32 Y A 0.0000
33 R A -0.9686
34 I A 0.0000
35 T A -0.5066
36 Y A -0.2745
37 G A 0.0000
38 E A -1.4697
39 T A -1.2153
40 G A -1.2167
41 G A -1.3802
42 N A -1.5196
43 S A -0.8064
44 P A -0.2804
45 V A 0.5009
46 Q A -0.7382
47 E A -1.5825
48 F A -0.6477
49 T A -0.3189
50 V A 0.0000
51 P A -1.2223
52 G A -1.4535
53 S A -1.4182
54 K A -2.2560
55 S A -1.4270
56 T A -0.7736
57 A A 0.0000
58 T A 0.2222
59 I A 0.0000
60 S A -0.6655
61 G A -1.0325
62 L A 0.0000
63 K A -2.3544
64 P A -1.6575
65 G A -1.4257
66 V A -1.3511
67 D A -2.0364
68 Y A 0.0000
69 T A -0.7747
70 I A 0.0000
71 T A -0.4164
72 V A 0.0000
73 Y A -0.9768
74 A A 0.0000
75 V A 0.0000
76 T A -0.9703
77 G A 0.1850
78 W A 1.4247
79 T A 1.1844
80 W A 1.9994
81 V A 1.3441
82 L A 0.4352
83 R A -2.1432
84 E A -2.5134
85 S A 0.0000
86 K A -2.3425
87 P A -1.3622
88 I A 0.0000
89 S A -0.6489
90 I A -0.5923
91 N A -1.7343
92 Y A -1.4866
93 R A -2.5198
94 T A -1.6348
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Laboratory of Theory of Biopolymers 2018