Project name: query_structure

Status: done

Started: 2026-03-16 23:46:40
Settings
Chain sequence(s) A: GVIPCGESCVFIPCINKKKCSCKNKVCYRD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:11)
Show buried residues

Minimal score value
-3.4114
Maximal score value
2.8297
Average score
-0.3381
Total score value
-10.1444

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.2219
2 V A 1.2555
3 I A 1.6856
4 P A 0.4756
5 C A 0.0620
6 G A -0.1653
7 E A 0.1087
8 S A 0.4656
9 C A 1.0485
10 V A 1.5818
11 F A 2.8297
12 I A 2.6390
13 P A 1.1817
14 C A 0.0000
15 I A 0.9988
16 N A -1.4403
17 K A -2.6867
18 K A -3.2696
19 K A -3.4114
20 C A 0.0000
21 S A -1.7654
22 C A -0.8748
23 K A -1.6494
24 N A -2.1350
25 K A -1.4887
26 V A -0.8245
27 C A 0.0000
28 Y A -0.8567
29 R A -2.2595
30 D A -1.8715
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Laboratory of Theory of Biopolymers 2018