| Chain sequence(s) |
A: SKIKGSRHWGFILGKRGEPPPGKPADDAGLVSRHWGFILGKRGEPPPGKPADDAGLVSRHWGFILGKRGEPPPGKPADDAGLVSRHWGFILGKRGEPPPGKPADDAGLV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | GF14A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 2.89183 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:42)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:44)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -0.7059 | |
| 2 | K | A | -1.3324 | |
| 3 | I | A | 0.3095 | |
| 4 | K | A | -1.6931 | |
| 5 | G | A | -1.3281 | |
| 6 | S | A | -1.6167 | |
| 7 | R | A | -2.6205 | |
| 8 | H | A | -1.4077 | |
| 9 | W | A | 0.7280 | |
| 10 | G | A | 1.4510 | |
| 11 | F | A | 3.2167 | |
| 12 | I | A | 2.3767 | |
| 13 | L | A | 2.1568 | |
| 14 | F | A | 1.3819 | mutated: GF14A |
| 15 | K | A | -1.6128 | |
| 16 | R | A | -1.9428 | |
| 17 | G | A | -1.7580 | |
| 18 | E | A | -2.6653 | |
| 19 | P | A | -1.5769 | |
| 20 | P | A | -1.4691 | |
| 21 | P | A | -1.4926 | |
| 22 | G | A | -1.6016 | |
| 23 | K | A | -2.4020 | |
| 24 | P | A | -1.9741 | |
| 25 | A | A | -1.9855 | |
| 26 | D | A | -2.9467 | |
| 27 | D | A | -2.8699 | |
| 28 | A | A | -1.2498 | |
| 29 | G | A | -0.5150 | |
| 30 | L | A | -0.2515 | |
| 31 | V | A | 0.0570 | |
| 32 | S | A | -1.1966 | |
| 33 | R | A | -1.8258 | |
| 34 | H | A | -1.2343 | |
| 35 | W | A | 0.4803 | |
| 36 | G | A | 0.0000 | |
| 37 | F | A | 2.5708 | |
| 38 | I | A | 1.8794 | |
| 39 | L | A | 1.6426 | |
| 40 | G | A | -0.6494 | |
| 41 | K | A | -3.0590 | |
| 42 | R | A | -3.0973 | |
| 43 | G | A | -3.0574 | |
| 44 | E | A | -2.8676 | |
| 45 | P | A | -1.8863 | |
| 46 | P | A | -1.5988 | |
| 47 | P | A | -1.4728 | |
| 48 | G | A | -1.5967 | |
| 49 | K | A | -2.3678 | |
| 50 | P | A | -2.1602 | |
| 51 | A | A | -1.8942 | |
| 52 | D | A | -3.1478 | |
| 53 | D | A | -2.7444 | |
| 54 | A | A | -1.5601 | |
| 55 | G | A | -0.1632 | |
| 56 | L | A | 0.9556 | |
| 57 | V | A | 1.0466 | |
| 58 | S | A | 0.0488 | |
| 59 | R | A | -0.8577 | |
| 60 | H | A | -1.1660 | |
| 61 | W | A | 0.1317 | |
| 62 | G | A | 1.3862 | |
| 63 | F | A | 2.5243 | |
| 64 | I | A | 1.4686 | |
| 65 | L | A | 1.0441 | |
| 66 | G | A | -1.3836 | |
| 67 | K | A | -4.0701 | |
| 68 | R | A | -4.4228 | |
| 69 | G | A | -3.8099 | |
| 70 | E | A | -3.3099 | |
| 71 | P | A | -2.1880 | |
| 72 | P | A | -1.5554 | |
| 73 | P | A | -1.3674 | |
| 74 | G | A | -1.6214 | |
| 75 | K | A | -2.3708 | |
| 76 | P | A | -1.9636 | |
| 77 | A | A | -2.0366 | |
| 78 | D | A | -2.9243 | |
| 79 | D | A | -2.6694 | |
| 80 | A | A | -1.0650 | |
| 81 | G | A | 0.2005 | |
| 82 | L | A | 1.6511 | |
| 83 | V | A | 1.6227 | |
| 84 | S | A | 0.1490 | |
| 85 | R | A | -1.3510 | |
| 86 | H | A | -1.2064 | |
| 87 | W | A | 0.3086 | |
| 88 | G | A | 1.1566 | |
| 89 | F | A | 2.7519 | |
| 90 | I | A | 1.6874 | |
| 91 | L | A | 1.2304 | |
| 92 | G | A | -1.4200 | |
| 93 | K | A | -3.3366 | |
| 94 | R | A | -4.2853 | |
| 95 | G | A | -3.8449 | |
| 96 | E | A | -3.2638 | |
| 97 | P | A | -1.9298 | |
| 98 | P | A | -1.3855 | |
| 99 | P | A | -1.4635 | |
| 100 | G | A | -1.6036 | |
| 101 | K | A | -2.4351 | |
| 102 | P | A | -2.0679 | |
| 103 | A | A | -1.9094 | |
| 104 | D | A | -3.1123 | |
| 105 | D | A | -2.6284 | |
| 106 | A | A | -0.6400 | |
| 107 | G | A | -0.0018 | |
| 108 | L | A | 1.9466 | |
| 109 | V | A | 2.4270 |