| Chain sequence(s) |
A: PGSPPSRLGGGGSDDDDKLDKIAQKAFVQWLIAGGPSSGAPPPSGKRLDKIAQKAFVQWLIAGGPS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 23 | P | A | -0.5968 | |
| 24 | G | A | -0.7630 | |
| 25 | S | A | -0.4458 | |
| 26 | P | A | -0.6797 | |
| 27 | P | A | -0.6957 | |
| 28 | S | A | -1.4633 | |
| 29 | R | A | -2.2314 | |
| 30 | L | A | -0.6641 | |
| 31 | G | A | -0.5333 | |
| 32 | G | A | -0.8946 | |
| 33 | G | A | 0.0000 | |
| 34 | G | A | -2.4460 | |
| 35 | S | A | 0.0000 | |
| 36 | D | A | -3.9216 | |
| 37 | D | A | -4.4688 | |
| 38 | D | A | -4.7059 | |
| 39 | D | A | -4.5445 | |
| 40 | K | A | -3.9143 | |
| 41 | L | A | 0.0000 | |
| 42 | D | A | -1.7114 | |
| 43 | K | A | -2.0380 | |
| 44 | I | A | -1.1736 | |
| 45 | A | A | -1.0040 | |
| 46 | Q | A | -1.7984 | |
| 47 | K | A | -2.1898 | |
| 48 | A | A | -0.8511 | |
| 49 | F | A | -0.5653 | |
| 50 | V | A | -1.0022 | |
| 51 | Q | A | -0.6846 | |
| 52 | W | A | 0.9221 | |
| 53 | L | A | 0.9373 | |
| 54 | I | A | 1.2812 | |
| 55 | A | A | 0.6723 | |
| 56 | G | A | 0.0265 | |
| 57 | G | A | -0.1844 | |
| 58 | P | A | -0.0279 | |
| 59 | S | A | -0.2773 | |
| 60 | S | A | -0.5491 | |
| 61 | G | A | -0.6243 | |
| 62 | A | A | -0.3593 | |
| 63 | P | A | -0.5938 | |
| 64 | P | A | -0.6183 | |
| 65 | P | A | -1.0798 | |
| 66 | S | A | -1.1270 | |
| 67 | G | A | -0.9364 | |
| 68 | K | A | -2.2628 | |
| 69 | R | A | -2.9258 | |
| 70 | L | A | -1.8176 | |
| 71 | D | A | -2.6282 | |
| 72 | K | A | -1.9147 | |
| 73 | I | A | 0.4620 | |
| 74 | A | A | -0.5648 | |
| 75 | Q | A | -1.2835 | |
| 76 | K | A | -1.1125 | |
| 77 | A | A | -0.2310 | |
| 78 | F | A | 0.7169 | |
| 79 | V | A | 0.0000 | |
| 80 | Q | A | -1.1667 | |
| 81 | W | A | 0.1410 | |
| 82 | L | A | 0.0000 | |
| 83 | I | A | -0.7222 | |
| 84 | A | A | -0.5121 | |
| 85 | G | A | -0.9009 | |
| 86 | G | A | -1.1901 | |
| 87 | P | A | -1.4689 | |
| 88 | S | A | -1.3113 |