| Chain sequence(s) |
A: SVSIPVHAHSDLTGRGHKWLKGDSVKTHLTRVEGWVWKNKFLTAAFCAVVWMVTDSLPTRFIVITVALCLAPTYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.8304 | |
| 2 | V | A | 2.0709 | |
| 3 | S | A | 1.7364 | |
| 4 | I | A | 2.6038 | |
| 5 | P | A | 1.3660 | |
| 6 | V | A | 1.5064 | |
| 7 | H | A | -0.2320 | |
| 8 | A | A | -0.6614 | |
| 9 | H | A | -1.2930 | |
| 10 | S | A | -1.2145 | |
| 11 | D | A | -1.5348 | |
| 12 | L | A | 0.0136 | |
| 13 | T | A | -0.6771 | |
| 14 | G | A | -1.7074 | |
| 15 | R | A | -2.4806 | |
| 16 | G | A | -1.9909 | |
| 17 | H | A | -2.1794 | |
| 18 | K | A | -2.4560 | |
| 19 | W | A | -0.5990 | |
| 20 | L | A | 0.1828 | |
| 21 | K | A | -2.0319 | |
| 22 | G | A | -1.7501 | |
| 23 | D | A | -2.5779 | |
| 24 | S | A | -1.7073 | |
| 25 | V | A | -1.5907 | |
| 26 | K | A | -2.4816 | |
| 27 | T | A | -1.9847 | |
| 28 | H | A | -1.9351 | |
| 29 | L | A | -1.3951 | |
| 30 | T | A | -1.9149 | |
| 31 | R | A | -2.4397 | |
| 32 | V | A | -1.4917 | |
| 33 | E | A | -2.2635 | |
| 34 | G | A | -1.6588 | |
| 35 | W | A | -1.2018 | |
| 36 | V | A | -0.6954 | |
| 37 | W | A | -0.4736 | |
| 38 | K | A | -1.4642 | |
| 39 | N | A | -0.6540 | |
| 40 | K | A | -0.6500 | |
| 41 | F | A | 1.5831 | |
| 42 | L | A | 1.4221 | |
| 43 | T | A | 1.0778 | |
| 44 | A | A | 1.1333 | |
| 45 | A | A | 1.5661 | |
| 46 | F | A | 2.2341 | |
| 47 | C | A | 2.3161 | |
| 48 | A | A | 1.9476 | |
| 49 | V | A | 2.7622 | |
| 50 | V | A | 0.0000 | |
| 51 | W | A | 2.0624 | |
| 52 | M | A | 2.4408 | |
| 53 | V | A | 2.4205 | |
| 54 | T | A | 0.8919 | |
| 55 | D | A | -0.8172 | |
| 56 | S | A | 0.1255 | |
| 57 | L | A | 1.5691 | |
| 58 | P | A | 1.3735 | |
| 59 | T | A | 1.4860 | |
| 60 | R | A | 2.5102 | |
| 61 | F | A | 3.5719 | |
| 62 | I | A | 3.8238 | |
| 63 | V | A | 3.0406 | |
| 64 | I | A | 2.7103 | |
| 65 | T | A | 2.5054 | |
| 66 | V | A | 2.9221 | |
| 67 | A | A | 2.3225 | |
| 68 | L | A | 1.6372 | |
| 69 | C | A | 1.7919 | |
| 70 | L | A | 1.8891 | |
| 71 | A | A | 1.4507 | |
| 72 | P | A | 0.0000 | |
| 73 | T | A | 1.0301 | |
| 74 | Y | A | 1.6015 | |
| 75 | A | A | 0.7909 |