| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHESDDDRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPDAGPPSPLYVKPPASSPTAVRPSTNYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQVSTPAINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9448 | |
| 2 | L | A | 1.9649 | |
| 3 | P | A | 0.6608 | |
| 4 | P | A | 0.3604 | |
| 5 | T | A | 0.1217 | |
| 6 | T | A | 0.1309 | |
| 7 | P | A | 0.1902 | |
| 8 | V | A | 1.2210 | |
| 9 | A | A | 0.0341 | |
| 10 | K | A | -1.1643 | |
| 11 | V | A | -0.4212 | |
| 12 | Q | A | -1.5315 | |
| 13 | S | A | -1.6134 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4446 | |
| 16 | E | A | -2.4520 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4590 | |
| 20 | P | A | 0.1061 | |
| 21 | T | A | 0.1174 | |
| 22 | S | A | -0.1690 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1017 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1702 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7573 | |
| 31 | R | A | -2.6237 | |
| 32 | L | A | -0.7529 | |
| 33 | L | A | 1.2264 | |
| 34 | T | A | 1.4600 | |
| 35 | V | A | 1.9871 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2411 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6349 | |
| 40 | K | A | -1.8755 | |
| 41 | D | A | -0.7669 | |
| 42 | I | A | 1.2393 | |
| 43 | V | A | 2.2152 | |
| 44 | V | A | 1.6698 | |
| 45 | N | A | -0.5117 | |
| 46 | G | A | -0.3532 | |
| 47 | K | A | -0.1220 | |
| 48 | V | A | 2.2056 | |
| 49 | L | A | 2.5336 | |
| 50 | V | A | 1.4698 | |
| 51 | P | A | 0.3590 | |
| 52 | K | A | -0.6775 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1073 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4759 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2994 | |
| 70 | K | A | -1.8132 | |
| 71 | F | A | -0.6626 | |
| 72 | A | A | -0.5661 | |
| 73 | L | A | -0.8567 | |
| 74 | P | A | -1.2610 | |
| 75 | Q | A | -2.4823 | |
| 76 | K | A | -3.1013 | |
| 77 | D | A | -2.9991 | |
| 78 | F | A | -1.6549 | |
| 79 | Y | A | -1.9324 | |
| 80 | D | A | -2.7723 | |
| 81 | P | A | -2.4146 | |
| 82 | E | A | -3.0791 | |
| 83 | K | A | -3.4370 | |
| 84 | E | A | -2.4938 | |
| 85 | R | A | -1.3182 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6418 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9737 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3339 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6890 | |
| 99 | G | A | -0.5181 | |
| 100 | P | A | -0.3759 | |
| 101 | L | A | 0.1079 | |
| 102 | G | A | -0.2273 | |
| 103 | K | A | -0.7299 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4686 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0950 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1510 | |
| 110 | L | A | -0.1030 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2006 | |
| 113 | K | A | -0.5465 | |
| 114 | L | A | -1.0045 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2718 | |
| 117 | T | A | -0.7807 | |
| 118 | E | A | -1.8831 | |
| 119 | N | A | -2.2603 | |
| 120 | P | A | -1.8829 | |
| 121 | T | A | -1.6065 | |
| 122 | E | A | -2.2317 | |
| 123 | P | A | -1.1786 | |
| 124 | V | A | -0.9570 | |
| 125 | H | A | -1.7163 | |
| 126 | E | A | -2.9777 | |
| 127 | S | A | -2.8741 | |
| 128 | D | A | -3.3249 | |
| 129 | D | A | -3.2772 | |
| 130 | D | A | -2.4104 | |
| 131 | R | A | -1.5605 | |
| 132 | V | A | -0.4590 | |
| 133 | N | A | -0.9033 | |
| 134 | F | A | -0.3906 | |
| 135 | S | A | -0.3666 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7040 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5452 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1989 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1569 | |
| 157 | D | A | 0.3266 | |
| 158 | L | A | 0.8040 | |
| 159 | A | A | 0.1730 | |
| 160 | E | A | -1.4418 | |
| 161 | P | A | -0.1922 | |
| 162 | C | A | 0.2012 | |
| 163 | P | A | -0.1506 | |
| 164 | G | A | -0.0476 | |
| 165 | L | A | 0.6397 | |
| 166 | P | A | -0.0886 | |
| 167 | P | A | -0.3286 | |
| 168 | G | A | -0.4139 | |
| 169 | A | A | -0.0132 | |
| 170 | C | A | 0.6761 | |
| 171 | P | A | 0.5372 | |
| 172 | P | A | 0.7876 | |
| 173 | I | A | 1.9890 | |
| 174 | Q | A | 0.8425 | |
| 175 | L | A | 1.4899 | |
| 176 | V | A | 0.8508 | |
| 177 | N | A | -0.2952 | |
| 178 | S | A | 0.0427 | |
| 179 | V | A | 0.4503 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3844 | |
| 182 | D | A | 0.0860 | |
| 183 | G | A | -0.1595 | |
| 184 | D | A | -0.5402 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1587 | |
| 190 | F | A | 0.0581 | |
| 191 | G | A | -0.1004 | |
| 192 | N | A | -0.2577 | |
| 193 | M | A | -0.1153 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4188 | |
| 197 | E | A | -2.6374 | |
| 198 | L | A | -1.2372 | |
| 199 | Q | A | -2.5596 | |
| 200 | Q | A | -3.3480 | |
| 201 | D | A | -3.6049 | |
| 202 | R | A | -3.3418 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2167 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3683 | |
| 211 | S | A | -1.8901 | |
| 212 | T | A | -1.4382 | |
| 213 | R | A | -2.0897 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1652 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3436 | |
| 220 | L | A | 0.5762 | |
| 221 | K | A | -1.1600 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9189 | |
| 224 | N | A | -1.6442 | |
| 225 | E | A | -1.2776 | |
| 226 | A | A | -0.6727 | |
| 227 | Y | A | -0.4503 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6847 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1332 | |
| 234 | F | A | 0.0452 | |
| 235 | G | A | -0.8938 | |
| 236 | R | A | -2.6213 | |
| 237 | R | A | -2.8212 | |
| 238 | E | A | -2.0194 | |
| 239 | Q | A | -0.0534 | |
| 240 | V | A | 1.6026 | |
| 241 | Y | A | 1.2588 | |
| 242 | A | A | 0.1635 | |
| 243 | R | A | -1.2631 | |
| 244 | H | A | -1.0194 | |
| 245 | F | A | 0.0555 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.4302 | |
| 249 | C | A | -1.2181 | |
| 250 | G | A | -1.2191 | |
| 251 | P | A | -1.0433 | |
| 252 | D | A | -1.4324 | |
| 253 | G | A | -1.2382 | |
| 254 | H | A | -1.4243 | |
| 255 | P | A | -1.4051 | |
| 256 | L | A | -0.4810 | |
| 257 | P | A | -0.8627 | |
| 258 | D | A | -1.7872 | |
| 259 | A | A | -0.8080 | |
| 260 | G | A | -0.9048 | |
| 261 | P | A | -0.7133 | |
| 262 | P | A | -0.1948 | |
| 263 | S | A | -0.0882 | |
| 264 | P | A | 0.6652 | |
| 265 | L | A | 1.5081 | |
| 266 | Y | A | 1.1397 | |
| 267 | V | A | 0.9539 | |
| 268 | K | A | -1.0353 | |
| 269 | P | A | -0.3888 | |
| 270 | P | A | -0.5754 | |
| 271 | A | A | -0.2660 | |
| 272 | S | A | -0.1754 | |
| 273 | S | A | -0.0790 | |
| 274 | P | A | -0.2230 | |
| 275 | T | A | -0.2461 | |
| 276 | A | A | -0.0307 | |
| 277 | V | A | 0.8765 | |
| 278 | R | A | -0.5633 | |
| 279 | P | A | -0.8347 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5263 | |
| 282 | N | A | -0.6009 | |
| 283 | Y | A | 1.0122 | |
| 284 | F | A | 0.7751 | |
| 285 | G | A | 0.2096 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9329 | |
| 291 | L | A | 1.6152 | |
| 292 | V | A | 0.6255 | |
| 293 | S | A | -0.1442 | |
| 294 | S | A | -0.9521 | |
| 295 | D | A | -1.8439 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1193 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6586 | |
| 301 | R | A | -1.8890 | |
| 302 | P | A | -0.9689 | |
| 303 | F | A | -0.1864 | |
| 304 | W | A | -0.5162 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0808 | |
| 307 | R | A | -2.9267 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7842 | |
| 310 | G | A | -1.4225 | |
| 311 | N | A | -1.3985 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9037 | |
| 319 | N | A | -0.8857 | |
| 320 | E | A | -1.0441 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3273 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1786 | |
| 333 | N | A | 0.3836 | |
| 334 | F | A | 1.4248 | |
| 335 | T | A | 0.6385 | |
| 336 | I | A | 0.3500 | |
| 337 | S | A | -0.9311 | |
| 338 | Q | A | -1.5781 | |
| 339 | Q | A | -0.8222 | |
| 340 | V | A | 0.6355 | |
| 341 | S | A | 0.3753 | |
| 342 | T | A | 0.0574 | |
| 343 | P | A | -0.1870 | |
| 344 | A | A | -0.0030 | |
| 345 | I | A | 0.4763 | |
| 346 | N | A | 0.0369 | |
| 347 | V | A | 1.7175 | |
| 348 | Y | A | 1.5180 | |
| 349 | D | A | -0.0549 | |
| 350 | P | A | -0.7021 | |
| 351 | S | A | -0.5375 | |
| 352 | N | A | -0.2098 | |
| 353 | F | A | -0.8833 | |
| 354 | K | A | -2.0793 | |
| 355 | N | A | -1.7998 | |
| 356 | Y | A | -0.0403 | |
| 357 | L | A | 0.6469 | |
| 358 | R | A | 0.9225 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4564 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0083 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9405 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6807 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3046 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3180 | |
| 376 | L | A | -1.7492 | |
| 377 | D | A | -2.0054 | |
| 378 | P | A | -1.0529 | |
| 379 | G | A | -1.0165 | |
| 380 | V | A | -0.9308 | |
| 381 | L | A | -0.5447 | |
| 382 | A | A | -0.6635 | |
| 383 | H | A | -0.8490 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4030 | |
| 386 | T | A | -0.5802 | |
| 387 | M | A | -0.3346 | |
| 388 | N | A | -0.8671 | |
| 389 | P | A | -1.2707 | |
| 390 | T | A | -1.5382 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5434 | |
| 393 | E | A | -2.9299 | |
| 394 | N | A | -2.6466 | |
| 395 | W | A | -1.5379 | |
| 396 | N | A | -1.4259 | |
| 397 | L | A | -0.2259 | |
| 398 | G | A | 0.5108 | |
| 399 | F | A | 2.4096 | |
| 400 | V | A | 1.8342 | |
| 401 | P | A | 0.0523 | |
| 402 | P | A | -1.8982 | |
| 403 | K | A | -3.5031 | |
| 404 | E | A | -3.8394 | |
| 405 | R | A | -4.0961 | |
| 406 | E | A | -3.8383 | |
| 407 | D | A | -2.8796 | |
| 408 | P | A | -1.7689 | |
| 409 | Y | A | -0.9870 | |
| 410 | K | A | -2.0980 | |
| 411 | G | A | -0.6374 | |
| 412 | L | A | 0.6716 | |
| 413 | I | A | 1.5913 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3740 | |
| 416 | E | A | -1.6187 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8278 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8888 | |
| 421 | E | A | -2.4930 | |
| 422 | R | A | -2.0578 | |
| 423 | F | A | -1.0163 | |
| 424 | S | A | -1.3211 | |
| 425 | Q | A | -1.8484 | |
| 426 | D | A | -2.8881 | |
| 427 | L | A | -1.9803 | |
| 428 | D | A | -2.7610 | |
| 429 | Q | A | -2.6047 | |
| 430 | F | A | -1.4330 | |
| 431 | A | A | -0.8845 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5340 | |
| 435 | K | A | -0.7005 | |
| 436 | F | A | 0.1685 | |
| 437 | L | A | 1.0476 | |
| 438 | Y | A | 0.8416 | |
| 439 | Q | A | -0.2587 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine