| Chain sequence(s) |
L: KLPAGADFAAFEKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 593 | K | L | -1.5309 | |
| 594 | L | L | 0.5612 | |
| 595 | P | L | -0.0806 | |
| 596 | A | L | -0.0721 | |
| 597 | G | L | -0.4508 | |
| 598 | A | L | -0.3845 | |
| 599 | D | L | -1.4384 | |
| 600 | F | L | 1.6272 | |
| 601 | A | L | 0.1860 | |
| 602 | A | L | 0.1929 | |
| 603 | F | L | 1.6201 | |
| 604 | E | L | -1.7771 | |
| 605 | K | L | -2.3462 | |
| 606 | D | L | -2.0944 |