| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPEHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPEGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGLPLPAAPPPSLLFVPPPPDSPLAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPANNVYDPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9489 | |
| 2 | L | A | 1.9698 | |
| 3 | P | A | 0.6565 | |
| 4 | P | A | 0.3696 | |
| 5 | T | A | 0.1254 | |
| 6 | T | A | 0.1268 | |
| 7 | P | A | 0.1894 | |
| 8 | V | A | 1.2233 | |
| 9 | A | A | 0.0396 | |
| 10 | K | A | -1.1517 | |
| 11 | V | A | -0.3900 | |
| 12 | Q | A | -1.5154 | |
| 13 | S | A | -1.5880 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4020 | |
| 16 | E | A | -2.4291 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4636 | |
| 20 | P | A | 0.1100 | |
| 21 | T | A | 0.1152 | |
| 22 | S | A | -0.1704 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1097 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1364 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6641 | |
| 31 | R | A | -2.5701 | |
| 32 | L | A | -0.7324 | |
| 33 | L | A | 1.2442 | |
| 34 | T | A | 1.6637 | |
| 35 | V | A | 2.0323 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2215 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6659 | |
| 40 | K | A | -1.8995 | |
| 41 | D | A | -0.7891 | |
| 42 | I | A | 1.2271 | |
| 43 | V | A | 2.1847 | |
| 44 | V | A | 1.6489 | |
| 45 | N | A | -0.5295 | |
| 46 | G | A | -0.3680 | |
| 47 | K | A | -0.1320 | |
| 48 | V | A | 2.1894 | |
| 49 | L | A | 2.5341 | |
| 50 | V | A | 1.4671 | |
| 51 | P | A | 0.3574 | |
| 52 | K | A | -0.6783 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1555 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3938 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3119 | |
| 70 | K | A | -1.8262 | |
| 71 | F | A | -0.6840 | |
| 72 | A | A | -0.5775 | |
| 73 | L | A | -0.8602 | |
| 74 | P | A | -1.2570 | |
| 75 | Q | A | -2.4738 | |
| 76 | K | A | -3.0915 | |
| 77 | D | A | -2.9879 | |
| 78 | F | A | -1.6416 | |
| 79 | Y | A | -1.9206 | |
| 80 | D | A | -2.7600 | |
| 81 | P | A | -2.3517 | |
| 82 | E | A | -3.0704 | |
| 83 | K | A | -3.4425 | |
| 84 | E | A | -2.4996 | |
| 85 | R | A | -1.3139 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6396 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9756 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3165 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6679 | |
| 99 | G | A | -0.5336 | |
| 100 | P | A | -0.4299 | |
| 101 | L | A | -0.0126 | |
| 102 | G | A | -0.3454 | |
| 103 | K | A | -0.9343 | |
| 104 | G | A | -0.6780 | |
| 105 | S | A | -0.6389 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1049 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4062 | |
| 110 | L | A | 0.2566 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1035 | |
| 113 | K | A | -0.1938 | |
| 114 | L | A | -0.9214 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6526 | |
| 117 | T | A | -1.4771 | |
| 118 | E | A | -2.5265 | |
| 119 | N | A | -2.6263 | |
| 120 | P | A | -2.2613 | |
| 121 | T | A | -1.8332 | |
| 122 | E | A | -2.5716 | |
| 123 | P | A | -1.5932 | |
| 124 | E | A | -1.7820 | |
| 125 | H | A | -1.3984 | |
| 126 | C | A | -1.1155 | |
| 127 | G | A | -1.4094 | |
| 128 | A | A | -1.2854 | |
| 129 | D | A | -2.1651 | |
| 130 | D | A | -1.7709 | |
| 131 | R | A | -1.1373 | |
| 132 | V | A | 0.1814 | |
| 133 | A | A | 0.4244 | |
| 134 | F | A | 0.2665 | |
| 135 | S | A | -0.1142 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8258 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2554 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5495 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2342 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1400 | |
| 157 | D | A | 0.3166 | |
| 158 | L | A | 0.7942 | |
| 159 | A | A | 0.1519 | |
| 160 | E | A | -1.4559 | |
| 161 | P | A | -0.2071 | |
| 162 | C | A | 0.2048 | |
| 163 | P | A | -0.1335 | |
| 164 | G | A | -0.2182 | |
| 165 | L | A | 0.3009 | |
| 166 | P | A | -0.8311 | |
| 167 | E | A | -1.8858 | |
| 168 | G | A | -1.1701 | |
| 169 | A | A | -0.2076 | |
| 170 | C | A | 0.7806 | |
| 171 | P | A | 0.3433 | |
| 172 | P | A | 0.7588 | |
| 173 | I | A | 1.9172 | |
| 174 | Q | A | 0.8056 | |
| 175 | L | A | 1.4725 | |
| 176 | V | A | 0.8298 | |
| 177 | N | A | -0.3552 | |
| 178 | S | A | 0.0007 | |
| 179 | V | A | 0.3882 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3693 | |
| 182 | D | A | 0.0734 | |
| 183 | G | A | -0.1598 | |
| 184 | D | A | -0.5617 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4790 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0938 | |
| 190 | F | A | 0.0309 | |
| 191 | G | A | -0.1525 | |
| 192 | N | A | -0.3125 | |
| 193 | M | A | -0.1462 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3701 | |
| 197 | E | A | -2.5703 | |
| 198 | L | A | -1.2232 | |
| 199 | Q | A | -2.5514 | |
| 200 | Q | A | -3.3253 | |
| 201 | D | A | -3.6016 | |
| 202 | R | A | -3.3526 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1626 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3465 | |
| 211 | S | A | -1.8526 | |
| 212 | T | A | -1.4200 | |
| 213 | R | A | -2.0784 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2072 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3072 | |
| 220 | L | A | 0.4886 | |
| 221 | K | A | -1.3386 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8999 | |
| 224 | N | A | -1.5915 | |
| 225 | E | A | -1.3452 | |
| 226 | A | A | -0.6774 | |
| 227 | Y | A | -0.4145 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7031 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0932 | |
| 234 | F | A | 0.2792 | |
| 235 | G | A | -0.8333 | |
| 236 | R | A | -2.6502 | |
| 237 | R | A | -2.9860 | |
| 238 | E | A | -2.1665 | |
| 239 | Q | A | -0.1581 | |
| 240 | V | A | 1.5523 | |
| 241 | Y | A | 1.2541 | |
| 242 | A | A | 0.1792 | |
| 243 | R | A | -1.1273 | |
| 244 | H | A | -1.1652 | |
| 245 | F | A | -0.2053 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5719 | |
| 249 | C | A | -0.9796 | |
| 250 | G | A | -0.9227 | |
| 251 | P | A | -0.5581 | |
| 252 | D | A | -0.4635 | |
| 253 | G | A | -0.0443 | |
| 254 | L | A | 1.0851 | |
| 255 | P | A | 0.4127 | |
| 256 | L | A | 0.8735 | |
| 257 | P | A | 0.4831 | |
| 258 | A | A | -0.0062 | |
| 259 | A | A | 0.7119 | |
| 260 | P | A | -0.1007 | |
| 261 | P | A | 0.0981 | |
| 262 | P | A | 0.5401 | |
| 263 | S | A | 1.5121 | |
| 264 | L | A | 2.6034 | |
| 265 | L | A | 2.9382 | |
| 266 | F | A | 2.5588 | |
| 267 | V | A | 2.3653 | |
| 268 | P | A | 1.1774 | |
| 269 | P | A | 0.4008 | |
| 270 | P | A | -0.6207 | |
| 271 | P | A | -0.9175 | |
| 272 | D | A | -1.8609 | |
| 273 | S | A | -0.4915 | |
| 274 | P | A | 0.0746 | |
| 275 | L | A | 1.3695 | |
| 276 | A | A | 0.8589 | |
| 277 | V | A | 1.9798 | |
| 278 | P | A | 1.0792 | |
| 279 | P | A | 0.0105 | |
| 280 | P | A | -0.2329 | |
| 281 | T | A | -0.2013 | |
| 282 | D | A | -0.7180 | |
| 283 | Y | A | 0.8027 | |
| 284 | F | A | 0.6792 | |
| 285 | G | A | 0.1331 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9022 | |
| 291 | L | A | 1.5840 | |
| 292 | V | A | 0.5676 | |
| 293 | S | A | -0.1658 | |
| 294 | S | A | -0.9691 | |
| 295 | D | A | -1.8460 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1539 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6504 | |
| 301 | R | A | -1.9326 | |
| 302 | P | A | -0.9847 | |
| 303 | F | A | -0.1657 | |
| 304 | W | A | -0.5195 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0783 | |
| 307 | R | A | -2.8227 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2313 | |
| 310 | G | A | -1.2118 | |
| 311 | N | A | -1.2954 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9143 | |
| 319 | N | A | -0.9024 | |
| 320 | E | A | -1.0588 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4003 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2495 | |
| 333 | N | A | 0.4008 | |
| 334 | F | A | 1.5177 | |
| 335 | T | A | 0.8259 | |
| 336 | I | A | 0.4618 | |
| 337 | S | A | -1.0636 | |
| 338 | Q | A | -1.9276 | |
| 339 | Q | A | -1.9006 | |
| 340 | L | A | -0.1016 | |
| 341 | S | A | -0.4020 | |
| 342 | T | A | -0.4844 | |
| 343 | P | A | -0.8262 | |
| 344 | A | A | -0.7886 | |
| 345 | N | A | -1.4086 | |
| 346 | N | A | -0.8641 | |
| 347 | V | A | 1.1021 | |
| 348 | Y | A | 1.1486 | |
| 349 | D | A | -0.3418 | |
| 350 | P | A | -0.6154 | |
| 351 | A | A | -0.3825 | |
| 352 | N | A | -0.6400 | |
| 353 | F | A | -1.1154 | |
| 354 | K | A | -2.1022 | |
| 355 | N | A | -1.7496 | |
| 356 | Y | A | 0.0627 | |
| 357 | L | A | 0.6821 | |
| 358 | R | A | 0.9635 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4828 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0040 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.8781 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6540 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3126 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3324 | |
| 376 | L | A | -1.7672 | |
| 377 | D | A | -2.0577 | |
| 378 | P | A | -1.0744 | |
| 379 | G | A | -1.0309 | |
| 380 | V | A | -0.9407 | |
| 381 | L | A | -0.5527 | |
| 382 | A | A | -0.6721 | |
| 383 | H | A | -0.8536 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4191 | |
| 386 | T | A | -0.5817 | |
| 387 | M | A | -0.3371 | |
| 388 | N | A | -0.8758 | |
| 389 | P | A | -1.2756 | |
| 390 | T | A | -1.5158 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5061 | |
| 393 | E | A | -2.8847 | |
| 394 | N | A | -2.7287 | |
| 395 | W | A | -1.4706 | |
| 396 | N | A | -1.3010 | |
| 397 | L | A | -0.2134 | |
| 398 | G | A | 0.5475 | |
| 399 | F | A | 2.4314 | |
| 400 | V | A | 1.8669 | |
| 401 | P | A | 0.0675 | |
| 402 | P | A | -1.8360 | |
| 403 | K | A | -3.4866 | |
| 404 | E | A | -3.9310 | |
| 405 | R | A | -4.0648 | |
| 406 | E | A | -3.8097 | |
| 407 | D | A | -2.8447 | |
| 408 | P | A | -1.7494 | |
| 409 | Y | A | -0.9759 | |
| 410 | K | A | -2.0876 | |
| 411 | G | A | -0.6258 | |
| 412 | L | A | 0.6683 | |
| 413 | I | A | 1.5769 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4091 | |
| 416 | E | A | -1.6937 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8571 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8998 | |
| 421 | E | A | -2.4958 | |
| 422 | R | A | -1.9814 | |
| 423 | F | A | -1.0203 | |
| 424 | S | A | -1.3319 | |
| 425 | Q | A | -1.8094 | |
| 426 | D | A | -2.9042 | |
| 427 | L | A | -1.9853 | |
| 428 | D | A | -2.7629 | |
| 429 | Q | A | -2.6083 | |
| 430 | F | A | -1.4228 | |
| 431 | A | A | -0.8779 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5259 | |
| 435 | K | A | -0.6855 | |
| 436 | F | A | 0.1799 | |
| 437 | L | A | 1.0548 | |
| 438 | Y | A | 0.8490 | |
| 439 | Q | A | -0.2528 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine