| Chain sequence(s) |
B: AALRALMAEEDARLARAKEVLDQLLELGQITEEQRERFLELMERLREARL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | 0.1954 | |
| 2 | A | B | 0.7514 | |
| 3 | L | B | 1.1958 | |
| 4 | R | B | -0.7318 | |
| 5 | A | B | -0.1372 | |
| 6 | L | B | 0.6029 | |
| 7 | M | B | -0.6128 | |
| 8 | A | B | -1.3187 | |
| 9 | E | B | -2.3397 | |
| 10 | E | B | -2.6774 | |
| 11 | D | B | -2.8170 | |
| 12 | A | B | -2.6056 | |
| 13 | R | B | -3.7219 | |
| 14 | L | B | -2.7982 | |
| 15 | A | B | -2.5551 | |
| 16 | R | B | -3.2203 | |
| 17 | A | B | -1.8745 | |
| 18 | K | B | -2.3877 | |
| 19 | E | B | -2.5327 | |
| 20 | V | B | -0.3646 | |
| 21 | L | B | 0.0000 | |
| 22 | D | B | -1.7732 | |
| 23 | Q | B | -1.1563 | |
| 24 | L | B | -0.4757 | |
| 25 | L | B | -1.3445 | |
| 26 | E | B | -1.5003 | |
| 27 | L | B | 0.1081 | |
| 28 | G | B | -0.9221 | |
| 29 | Q | B | -1.0821 | |
| 30 | I | B | -1.3309 | |
| 31 | T | B | -2.4986 | |
| 32 | E | B | -3.8418 | |
| 33 | E | B | -4.0946 | |
| 34 | Q | B | -3.5136 | |
| 35 | R | B | -3.0048 | |
| 36 | E | B | -4.2087 | |
| 37 | R | B | -3.7284 | |
| 38 | F | B | -1.7699 | |
| 39 | L | B | -2.0888 | |
| 40 | E | B | -2.8565 | |
| 41 | L | B | -1.2973 | |
| 42 | M | B | -1.9066 | |
| 43 | E | B | -3.5787 | |
| 44 | R | B | -3.4016 | |
| 45 | L | B | -2.0800 | |
| 46 | R | B | -3.0766 | |
| 47 | E | B | -3.0568 | |
| 48 | A | B | -2.0287 | |
| 49 | R | B | -1.9547 | |
| 50 | L | B | 0.1928 |