| Chain sequence(s) |
A: MGSSHHHHHHSSGENLYFQGAMAIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEVSLRVDALITATIEGRKVMLYTQKVRHFLEVDEPNALHLWVTDNNRTFHLGPFSVDCAENKTFANTLLYSDDALHLLQAKGDHESTAVSLAR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:07)
[INFO] Main: Simulation completed successfully. (00:06:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| 1 | M | A | 0.7440 | |
| 2 | G | A | -0.2131 | |
| 3 | S | A | -0.6322 | |
| 4 | S | A | -1.1628 | |
| 5 | H | A | -2.0441 | |
| 6 | H | A | -2.3743 | |
| 7 | H | A | -2.5682 | |
| 8 | H | A | -2.5562 | |
| 9 | H | A | -2.3951 | |
| 10 | H | A | -2.0498 | |
| 11 | S | A | -1.6683 | |
| 12 | S | A | -1.8043 | |
| 13 | G | A | -1.6531 | |
| 14 | E | A | -2.1235 | |
| 15 | N | A | -1.1900 | |
| 16 | L | A | 0.7382 | |
| 17 | Y | A | 1.3794 | |
| 18 | F | A | 1.2429 | |
| 19 | Q | A | -0.2560 | |
| 20 | G | A | -0.5495 | |
| 21 | A | A | -0.3389 | |
| 22 | M | A | 0.0239 | |
| 23 | A | A | 0.1328 | |
| 24 | I | A | 0.2871 | |
| 25 | A | A | 0.3432 | |
| 26 | M | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | V | A | -0.2228 | |
| 29 | P | A | -1.0999 | |
| 30 | N | A | -2.0909 | |
| 31 | K | A | -2.3403 | |
| 32 | T | A | 0.0000 | |
| 33 | Q | A | -1.8271 | |
| 34 | V | A | 0.0000 | |
| 35 | V | A | -1.5416 | |
| 36 | P | A | -1.8488 | |
| 37 | K | A | -1.7261 | |
| 38 | S | A | -1.3957 | |
| 39 | G | A | -1.5183 | |
| 40 | G | A | -2.0110 | |
| 41 | E | A | -2.7198 | |
| 42 | G | A | -2.2807 | |
| 43 | K | A | -2.4859 | |
| 44 | V | A | -1.0791 | |
| 45 | K | A | 0.0000 | |
| 46 | D | A | -1.3101 | |
| 47 | I | A | -0.8555 | |
| 48 | F | A | 0.0000 | |
| 49 | A | A | -0.0134 | |
| 50 | S | A | 0.0186 | |
| 51 | P | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | V | A | 0.0000 | |
| 55 | R | A | -1.1108 | |
| 56 | A | A | 0.0000 | |
| 57 | G | A | -1.6197 | |
| 58 | G | A | -1.2395 | |
| 59 | V | A | 0.0000 | |
| 60 | M | A | 0.0000 | |
| 61 | I | A | 0.0000 | |
| 62 | A | A | 0.0000 | |
| 63 | F | A | 0.0000 | |
| 64 | V | A | 0.0000 | |
| 65 | E | A | 0.0000 | |
| 66 | G | A | 0.0000 | |
| 67 | R | A | -0.6139 | |
| 68 | T | A | -0.9439 | |
| 69 | K | A | -1.4183 | |
| 70 | N | A | -1.6191 | |
| 71 | K | A | -1.9567 | |
| 72 | L | A | -0.7965 | |
| 73 | F | A | 0.0000 | |
| 74 | P | A | -1.1673 | |
| 75 | E | A | -1.4626 | |
| 76 | V | A | 0.1094 | |
| 77 | I | A | 0.3643 | |
| 78 | D | A | -1.4641 | |
| 79 | L | A | 0.0000 | |
| 80 | S | A | 0.0000 | |
| 81 | S | A | 0.0000 | |
| 82 | S | A | 0.0000 | |
| 83 | D | A | -0.7901 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | G | A | 0.0000 | |
| 88 | Y | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | K | A | -1.9030 | |
| 91 | A | A | -1.4003 | |
| 92 | P | A | -1.5489 | |
| 93 | E | A | -2.4582 | |
| 94 | T | A | -1.2669 | |
| 95 | W | A | -1.1058 | |
| 96 | Q | A | -1.4145 | |
| 97 | S | A | -1.2519 | |
| 98 | L | A | 0.0000 | |
| 99 | V | A | -0.2516 | |
| 100 | A | A | -0.5761 | |
| 101 | E | A | -0.9949 | |
| 102 | V | A | 0.0000 | |
| 103 | T | A | -0.7544 | |
| 104 | K | A | -1.4049 | |
| 105 | E | A | -1.6627 | |
| 106 | Y | A | -0.0778 | |
| 107 | W | A | -0.5342 | |
| 108 | Q | A | -0.9156 | |
| 109 | A | A | 0.0000 | |
| 110 | H | A | -0.9050 | |
| 111 | T | A | 0.0000 | |
| 112 | V | A | 0.0000 | |
| 113 | L | A | 0.0000 | |
| 114 | E | A | -1.5826 | |
| 115 | S | A | -1.2055 | |
| 116 | A | A | -1.3067 | |
| 117 | N | A | -2.4565 | |
| 118 | N | A | -2.6246 | |
| 119 | S | A | -2.3118 | |
| 120 | N | A | -2.4025 | |
| 121 | H | A | -1.8339 | |
| 122 | R | A | -2.6584 | |
| 123 | V | A | 0.0000 | |
| 124 | G | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | R | A | -0.4416 | |
| 128 | L | A | -0.0314 | |
| 129 | P | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | G | A | 0.0000 | |
| 132 | I | A | 0.0000 | |
| 133 | T | A | -1.1381 | |
| 134 | R | A | -1.9880 | |
| 135 | G | A | -1.7658 | |
| 136 | N | A | -2.0931 | |
| 137 | K | A | -2.5305 | |
| 138 | V | A | 0.0000 | |
| 139 | F | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | V | A | 0.0000 | |
| 143 | G | A | 0.0000 | |
| 144 | S | A | -0.6532 | |
| 145 | Y | A | 0.0000 | |
| 146 | E | A | 0.0000 | |
| 147 | E | A | -1.6033 | |
| 148 | R | A | -1.6946 | |
| 149 | R | A | -0.9510 | |
| 150 | E | A | -0.5317 | |
| 151 | I | A | 0.7813 | |
| 152 | D | A | -1.3149 | |
| 153 | D | A | -1.2224 | |
| 154 | Y | A | 0.8298 | |
| 155 | I | A | 0.5813 | |
| 156 | W | A | -0.2457 | |
| 157 | K | A | -1.3086 | |
| 158 | A | A | -0.9981 | |
| 159 | E | A | -1.0098 | |
| 160 | A | A | -0.6402 | |
| 161 | W | A | -0.9607 | |
| 162 | N | A | -1.5677 | |
| 163 | I | A | 0.0000 | |
| 164 | K | A | -0.9461 | |
| 165 | V | A | 0.0000 | |
| 166 | I | A | 0.0000 | |
| 167 | E | A | -1.4406 | |
| 168 | G | A | 0.0000 | |
| 169 | E | A | -2.8298 | |
| 170 | A | A | 0.0000 | |
| 171 | T | A | -1.8038 | |
| 172 | Q | A | -1.8141 | |
| 173 | S | A | -1.2863 | |
| 174 | T | A | -1.0283 | |
| 175 | E | A | -1.6416 | |
| 176 | V | A | 0.2798 | |
| 177 | Q | A | -1.1180 | |
| 178 | P | A | -1.2667 | |
| 179 | T | A | -0.6634 | |
| 180 | Q | A | -1.0676 | |
| 181 | P | A | 0.0000 | |
| 182 | I | A | 0.0000 | |
| 183 | N | A | -1.9844 | |
| 184 | W | A | -1.6925 | |
| 185 | S | A | -1.6385 | |
| 186 | E | A | -2.0761 | |
| 187 | P | A | -1.3211 | |
| 188 | K | A | -1.3402 | |
| 189 | P | A | -1.1072 | |
| 190 | L | A | 0.0000 | |
| 191 | F | A | -1.3684 | |
| 192 | Q | A | -2.0829 | |
| 193 | T | A | -1.5816 | |
| 194 | D | A | -2.4402 | |
| 195 | S | A | -2.2860 | |
| 196 | P | A | -2.1858 | |
| 197 | N | A | -3.0981 | |
| 198 | N | A | -2.7968 | |
| 199 | K | A | -2.8424 | |
| 200 | G | A | -2.8890 | |
| 201 | D | A | -3.8891 | |
| 202 | L | A | -2.9554 | |
| 203 | K | A | -3.1944 | |
| 204 | E | A | -2.1872 | |
| 205 | F | A | 0.0000 | |
| 206 | L | A | 0.0000 | |
| 207 | G | A | 0.0000 | |
| 208 | G | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | G | A | 0.0000 | |
| 211 | S | A | 0.1720 | |
| 212 | G | A | 0.0000 | |
| 213 | I | A | 0.4073 | |
| 214 | V | A | 0.2654 | |
| 215 | M | A | 0.0000 | |
| 216 | G | A | -1.5812 | |
| 217 | N | A | -1.7699 | |
| 218 | G | A | -1.1696 | |
| 219 | T | A | 0.0000 | |
| 220 | L | A | 0.0000 | |
| 221 | V | A | 0.0000 | |
| 222 | F | A | 0.0000 | |
| 223 | P | A | 0.0000 | |
| 224 | L | A | 0.0000 | |
| 225 | T | A | -0.2123 | |
| 226 | A | A | 0.0000 | |
| 227 | K | A | -2.4590 | |
| 228 | D | A | -3.3030 | |
| 229 | E | A | -3.6911 | |
| 230 | S | A | -2.4384 | |
| 231 | N | A | -3.0718 | |
| 232 | K | A | -2.1066 | |
| 233 | V | A | 0.0000 | |
| 234 | F | A | 0.0239 | |
| 235 | S | A | 0.0000 | |
| 236 | L | A | 0.0000 | |
| 237 | I | A | 0.0000 | |
| 238 | T | A | 0.0000 | |
| 239 | Y | A | -0.6153 | |
| 240 | S | A | 0.0000 | |
| 241 | T | A | -1.5795 | |
| 242 | D | A | -1.9764 | |
| 243 | D | A | -2.4776 | |
| 244 | G | A | 0.0000 | |
| 245 | Q | A | -2.6023 | |
| 246 | K | A | -3.0284 | |
| 247 | W | A | -2.0043 | |
| 248 | E | A | -1.9003 | |
| 249 | I | A | -0.9959 | |
| 250 | P | A | 0.0000 | |
| 251 | G | A | -1.6150 | |
| 252 | G | A | -0.8225 | |
| 253 | V | A | 0.5041 | |
| 254 | S | A | 0.0000 | |
| 255 | S | A | 0.1364 | |
| 256 | V | A | 0.6613 | |
| 257 | A | A | -0.7181 | |
| 258 | C | A | 0.0000 | |
| 259 | R | A | -0.9059 | |
| 260 | S | A | -0.4382 | |
| 261 | P | A | 0.0000 | |
| 262 | R | A | 0.0000 | |
| 263 | V | A | 0.0000 | |
| 264 | T | A | 0.0000 | |
| 265 | E | A | -0.9402 | |
| 266 | W | A | -1.4655 | |
| 267 | E | A | -2.8554 | |
| 268 | E | A | -3.2072 | |
| 269 | G | A | -2.4220 | |
| 270 | T | A | 0.0000 | |
| 271 | L | A | 0.0000 | |
| 272 | L | A | 0.0000 | |
| 273 | M | A | 0.0000 | |
| 274 | V | A | 0.0000 | |
| 275 | T | A | 0.0000 | |
| 276 | Y | A | 0.0000 | |
| 277 | C | A | 0.0000 | |
| 278 | E | A | -3.1479 | |
| 279 | D | A | -3.2331 | |
| 280 | G | A | 0.0000 | |
| 281 | R | A | 0.0000 | |
| 282 | K | A | -0.7340 | |
| 283 | V | A | 0.0000 | |
| 284 | F | A | 0.0000 | |
| 285 | E | A | -1.0622 | |
| 286 | S | A | 0.0000 | |
| 287 | R | A | -3.0053 | |
| 288 | D | A | -2.1297 | |
| 289 | M | A | -1.2517 | |
| 290 | G | A | 0.0000 | |
| 291 | K | A | -2.1730 | |
| 292 | T | A | -1.3783 | |
| 293 | W | A | -0.9170 | |
| 294 | T | A | -0.4216 | |
| 295 | E | A | -0.2947 | |
| 296 | A | A | 0.2914 | |
| 297 | F | A | 1.4465 | |
| 298 | G | A | 0.1594 | |
| 299 | T | A | -0.1998 | |
| 300 | L | A | 0.0000 | |
| 301 | P | A | -0.4374 | |
| 302 | G | A | -0.1960 | |
| 303 | V | A | 0.0000 | |
| 304 | W | A | 0.0442 | |
| 305 | L | A | -0.8362 | |
| 306 | K | A | -2.3194 | |
| 307 | S | A | -2.4047 | |
| 308 | G | A | -1.7875 | |
| 309 | P | A | -1.5935 | |
| 310 | E | A | -2.2031 | |
| 311 | L | A | -1.5207 | |
| 312 | P | A | -1.2699 | |
| 313 | E | A | -1.9225 | |
| 314 | V | A | 0.0181 | |
| 315 | S | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | R | A | -0.4251 | |
| 318 | V | A | 0.0000 | |
| 319 | D | A | 0.0000 | |
| 320 | A | A | 0.0000 | |
| 321 | L | A | 0.0000 | |
| 322 | I | A | 0.3237 | |
| 323 | T | A | -0.0212 | |
| 324 | A | A | -0.7999 | |
| 325 | T | A | -1.6839 | |
| 326 | I | A | -1.8299 | |
| 327 | E | A | -2.7828 | |
| 328 | G | A | -2.3719 | |
| 329 | R | A | -3.0249 | |
| 330 | K | A | -2.4050 | |
| 331 | V | A | 0.0000 | |
| 332 | M | A | 0.0000 | |
| 333 | L | A | 0.0000 | |
| 334 | Y | A | 0.0000 | |
| 335 | T | A | 0.0000 | |
| 336 | Q | A | 0.0000 | |
| 337 | K | A | 0.0000 | |
| 338 | V | A | 0.1623 | |
| 339 | R | A | -0.5188 | |
| 340 | H | A | -0.4697 | |
| 341 | F | A | 1.5293 | |
| 342 | L | A | 1.1504 | |
| 343 | E | A | -0.9928 | |
| 344 | V | A | 0.2351 | |
| 345 | D | A | -2.0011 | |
| 346 | E | A | -1.9419 | |
| 347 | P | A | -1.1148 | |
| 348 | N | A | -0.4657 | |
| 349 | A | A | 0.2318 | |
| 350 | L | A | 0.0000 | |
| 351 | H | A | 0.0000 | |
| 352 | L | A | 0.0000 | |
| 353 | W | A | 0.3373 | |
| 354 | V | A | 0.0000 | |
| 355 | T | A | 0.0000 | |
| 356 | D | A | -1.7612 | |
| 357 | N | A | -1.9437 | |
| 358 | N | A | -2.5690 | |
| 359 | R | A | -2.3228 | |
| 360 | T | A | -0.7152 | |
| 361 | F | A | 0.9232 | |
| 362 | H | A | 0.1791 | |
| 363 | L | A | 0.7886 | |
| 364 | G | A | 0.6798 | |
| 365 | P | A | 0.7414 | |
| 366 | F | A | 0.8552 | |
| 367 | S | A | 0.8021 | |
| 368 | V | A | 1.3184 | |
| 369 | D | A | 0.0000 | |
| 370 | C | A | -0.5825 | |
| 371 | A | A | -1.1799 | |
| 372 | E | A | -2.8291 | |
| 373 | N | A | -2.1070 | |
| 374 | K | A | -1.4604 | |
| 375 | T | A | 0.0000 | |
| 376 | F | A | -0.0634 | |
| 377 | A | A | 0.1362 | |
| 378 | N | A | 0.0000 | |
| 379 | T | A | 0.0000 | |
| 380 | L | A | 0.0000 | |
| 381 | L | A | 0.0234 | |
| 382 | Y | A | -0.3953 | |
| 383 | S | A | -1.2351 | |
| 384 | D | A | -2.8227 | |
| 385 | D | A | -2.6959 | |
| 386 | A | A | -1.5647 | |
| 387 | L | A | -0.7839 | |
| 388 | H | A | 0.0000 | |
| 389 | L | A | 0.0000 | |
| 390 | L | A | 0.0000 | |
| 391 | Q | A | 0.0000 | |
| 392 | A | A | 0.0000 | |
| 393 | K | A | -1.1904 | |
| 394 | G | A | 0.0000 | |
| 395 | D | A | -2.7101 | |
| 396 | H | A | -2.6185 | |
| 397 | E | A | -2.8266 | |
| 398 | S | A | -2.0311 | |
| 399 | T | A | 0.0000 | |
| 400 | A | A | -0.2033 | |
| 401 | V | A | 0.0000 | |
| 402 | S | A | 0.1905 | |
| 403 | L | A | 0.0000 | |
| 404 | A | A | -0.4555 | |
| 405 | R | A | -1.4285 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine