Project name: shExoU

Status: done

Started: 2026-07-15 16:13:16
Settings
Chain sequence(s) A: LPESVSDVRFSSPQGQGESRTLTDSAGPRQITLRQFENGVTELQLSRPPLTSLVLSGGGAKGAAYPGAMLALEEKGMLDGIRSMSGSSAGGITAALLASGMSPAAFKTLSDKMDLISLLDSSNKKLKLFQHISSEIGASLKKGLGNKIGGFSELLLNVLPRIDSRAEPLERLLRDETRKAVLGQIATHPEVARQPTVAAIASRLQSGSGVTFGDLDRLSAYIPQIKTLNITGTAMFEGRPQLVVFNASHTPDLEVAQAAHISGSFPGVFQKVSLSDQPYQAGVEWTEFQDGGVMINVPVPEMIDKNFDSGPLRRNDNLILEFEGEAGEVAPDRGTRGGALKGWVVGVPALQAREMLQLEGLEELREQTVVVPLKSERGDFSGMLGGTLNFTMPDEIKAHLQERLQERVGEHLEKRLQASERHTFASLDEALLALDDSMLTSVAQQNPEITDGAVAFRQKARDAFTELTVAIVSANGLAGRLKLDEAMRSALQRLDALADTPERLAWLAAELNHADNVDHQQLLDAMRGQTVQSPVLAAALAEAQRRKVAVIAENIRKEVIFPSLYRPGQPDSNVALLRRAEEQLRHATSPAEINQALNDIVDNYSARGFLRFGKPLSSTTVEMAKAWRNKEFT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:15:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:15:20)
Show buried residues

Minimal score value
-4.2126
Maximal score value
1.7548
Average score
-0.9117
Total score value
-577.0807

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 0.9478
2 P A -0.2007
3 E A -1.4494
4 S A -0.3085
5 V A 0.7720
6 S A -0.2690
7 D A -0.7925
8 V A 0.0494
9 R A -0.0230
10 F A 1.1913
11 S A 0.1282
12 S A -0.5590
13 P A -1.2438
14 Q A -1.8684
15 G A -1.6033
16 Q A -1.8866
17 G A -1.9385
18 E A 0.0000
19 S A -1.4086
20 R A -0.7867
21 T A -0.1867
22 L A 0.0000
23 T A -0.0332
24 D A 0.0000
25 S A -0.7087
26 A A 0.0000
27 G A -0.8795
28 P A -0.8407
29 R A 0.0000
30 Q A -1.2770
31 I A 0.0000
32 T A -0.7417
33 L A 0.0000
34 R A -0.6125
35 Q A -0.9621
36 F A -1.5884
37 E A -2.5924
38 N A -2.0556
39 G A -1.0506
40 V A -0.3640
41 T A 0.0000
42 E A 0.0000
43 L A 0.0000
44 Q A -1.7592
45 L A 0.0000
46 S A -1.1371
47 R A -0.9403
48 P A 0.0000
49 P A -0.4043
50 L A 0.0000
51 T A -0.7469
52 S A 0.0000
53 L A 0.0000
54 V A 0.0000
55 L A 0.0000
56 S A 0.0000
57 G A 0.0000
58 G A -0.1804
59 G A -0.0506
60 A A 0.0142
61 K A 0.0000
62 G A -0.0851
63 A A -0.2276
64 A A 0.0000
65 Y A 0.0000
66 P A 0.0000
67 G A 0.0000
68 A A 0.0000
69 M A 0.0000
70 L A -1.5413
71 A A 0.0000
72 L A 0.0000
73 E A -3.3505
74 E A -3.2052
75 K A -2.9421
76 G A -2.4635
77 M A -1.8447
78 L A 0.0000
79 D A -2.6284
80 G A -1.4237
81 I A 0.0000
82 R A -1.4897
83 S A -0.7082
84 M A 0.0000
85 S A 0.0000
86 G A 0.0000
87 S A 0.0000
88 S A 0.0000
89 A A 0.0313
90 G A 0.0000
91 G A 0.0000
92 I A 0.2257
93 T A 0.0000
94 A A 0.0000
95 A A 0.0000
96 L A 0.0000
97 L A 0.0000
98 A A 0.0000
99 S A 0.0000
100 G A 0.0000
101 M A 0.0000
102 S A -0.3917
103 P A 0.0000
104 A A -0.2839
105 A A -0.2266
106 F A 0.0000
107 K A -0.8747
108 T A -0.9608
109 L A 0.0000
110 S A -1.2138
111 D A -2.2233
112 K A -2.5399
113 M A -1.4127
114 D A -1.4840
115 L A -0.2555
116 I A -0.2367
117 S A -0.4844
118 L A -0.7867
119 L A 0.0000
120 D A -1.8977
121 S A -1.4798
122 S A -1.2696
123 N A -2.1894
124 K A -2.7467
125 K A -2.7266
126 L A 0.0000
127 K A -1.9018
128 L A -0.8339
129 F A 0.0000
130 Q A -1.1590
131 H A -1.5363
132 I A 0.0000
133 S A 0.0000
134 S A -1.1028
135 E A -2.1698
136 I A 0.0000
137 G A 0.0000
138 A A -1.5729
139 S A 0.0000
140 L A 0.0000
141 K A -3.6005
142 K A -2.7889
143 G A -2.3502
144 L A -1.0387
145 G A -1.8904
146 N A -1.8325
147 K A -1.8517
148 I A -1.4680
149 G A -1.6473
150 G A -1.4268
151 F A 0.0000
152 S A 0.0000
153 E A -1.7231
154 L A -0.1817
155 L A 0.0000
156 L A -0.9715
157 N A -1.5436
158 V A 0.0000
159 L A 0.0000
160 P A -1.6259
161 R A -2.9348
162 I A 0.0000
163 D A -3.1011
164 S A 0.0000
165 R A -2.6087
166 A A 0.0000
167 E A -2.6123
168 P A -1.7357
169 L A 0.0000
170 E A -2.0910
171 R A -2.7917
172 L A -1.5543
173 L A 0.0000
174 R A -2.3166
175 D A -2.5319
176 E A -1.9590
177 T A 0.0000
178 R A -1.9423
179 K A -2.4823
180 A A -1.3274
181 V A 0.0000
182 L A -0.8562
183 G A -0.7516
184 Q A -0.6218
185 I A 0.0000
186 A A -0.3510
187 T A -0.4874
188 H A -1.0170
189 P A -1.6930
190 E A -2.5555
191 V A 0.0000
192 A A -1.6577
193 R A -2.7727
194 Q A -1.7750
195 P A -0.9373
196 T A -0.8458
197 V A 0.0000
198 A A -0.7963
199 A A -0.6236
200 I A 0.0000
201 A A -0.6444
202 S A -0.9856
203 R A -1.2755
204 L A 0.0000
205 Q A -1.9276
206 S A -1.2986
207 G A -1.3662
208 S A -1.0678
209 G A 0.0000
210 V A 0.0000
211 T A -1.1767
212 F A 0.0000
213 G A -1.6219
214 D A 0.0000
215 L A 0.0000
216 D A -2.0595
217 R A -2.2423
218 L A 0.0000
219 S A -0.9722
220 A A -0.5384
221 Y A -0.0631
222 I A 0.0000
223 P A -0.6724
224 Q A -0.8980
225 I A 0.0000
226 K A 0.0000
227 T A -0.9766
228 L A 0.0000
229 N A -0.4152
230 I A 0.0000
231 T A 0.0000
232 G A 0.0000
233 T A 0.0000
234 A A 0.0000
235 M A -0.3590
236 F A -0.8407
237 E A -1.8809
238 G A -1.2366
239 R A -1.1315
240 P A -0.4632
241 Q A 0.0000
242 L A 0.2303
243 V A 0.0000
244 V A 0.0000
245 F A 0.0000
246 N A -0.8273
247 A A -1.2356
248 S A -0.8372
249 H A -0.9917
250 T A 0.0000
251 P A -1.5796
252 D A -2.0978
253 L A 0.0000
254 E A -0.8771
255 V A 0.0000
256 A A 0.0000
257 Q A -0.8508
258 A A 0.0000
259 A A 0.0000
260 H A 0.0000
261 I A 0.0000
262 S A 0.0000
263 G A -0.1694
264 S A 0.0000
265 F A -0.0503
266 P A -0.3636
267 G A -0.8543
268 V A 0.0000
269 F A 0.0000
270 Q A -2.3924
271 K A -1.9902
272 V A -1.0968
273 S A -1.2294
274 L A -1.4476
275 S A -1.9254
276 D A -2.5239
277 Q A -2.3744
278 P A -1.9392
279 Y A -1.2743
280 Q A -1.5104
281 A A -0.8621
282 G A -0.9421
283 V A -1.0285
284 E A -2.4389
285 W A 0.0000
286 T A -1.3928
287 E A -1.5120
288 F A 0.0000
289 Q A 0.0000
290 D A 0.0000
291 G A 0.0000
292 G A 0.0000
293 V A 0.0000
294 M A 0.0000
295 I A 0.0000
296 N A 0.0000
297 V A 0.0000
298 P A 0.0000
299 V A 0.0000
300 P A -0.7800
301 E A -1.0151
302 M A 0.0000
303 I A -0.6904
304 D A -1.8244
305 K A -2.3281
306 N A -2.1629
307 F A -1.4665
308 D A -1.8411
309 S A -1.2063
310 G A -1.2535
311 P A -1.0758
312 L A 0.0000
313 R A -1.8310
314 R A -1.2903
315 N A 0.0000
316 D A 0.0000
317 N A 0.0000
318 L A 0.0000
319 I A 0.0000
320 L A 0.0000
321 E A 0.0000
322 F A 0.0000
323 E A -0.8681
324 G A -0.6114
325 E A -0.3812
326 A A -0.4491
327 G A -0.0226
328 E A 0.2259
329 V A 1.1753
330 A A 0.0034
331 P A -1.0065
332 D A -2.8321
333 R A -3.1630
334 G A -2.3106
335 T A -2.1852
336 R A -2.6293
337 G A -1.7008
338 G A 0.0000
339 A A -1.6659
340 L A 0.0000
341 K A -0.6594
342 G A -0.4763
343 W A 0.5829
344 V A 0.0000
345 V A 0.4131
346 G A 0.3425
347 V A 0.1607
348 P A -0.0970
349 A A 0.0000
350 L A 0.0000
351 Q A -0.1051
352 A A 0.0000
353 R A -0.1816
354 E A -0.1153
355 M A 0.2026
356 L A 0.0000
357 Q A 0.0000
358 L A -0.3321
359 E A -0.9969
360 G A 0.0000
361 L A 0.0000
362 E A -3.2422
363 E A -3.3741
364 L A 0.0000
365 R A -3.2135
366 E A -2.4774
367 Q A 0.0000
368 T A -0.7672
369 V A 0.0000
370 V A 0.0985
371 V A 0.0000
372 P A 0.0000
373 L A 0.0000
374 K A -3.2651
375 S A -3.0248
376 E A -3.4695
377 R A -4.2126
378 G A -3.5141
379 D A -3.4884
380 F A 0.0000
381 S A -1.2068
382 G A -0.9699
383 M A 0.0000
384 L A -0.1279
385 G A -0.9143
386 G A 0.0000
387 T A -0.0801
388 L A 0.0000
389 N A 0.0000
390 F A 0.1169
391 T A -0.7374
392 M A -0.8052
393 P A 0.0000
394 D A -2.7738
395 E A -2.3904
396 I A 0.0000
397 K A -1.6282
398 A A -1.7065
399 H A -2.3955
400 L A 0.0000
401 Q A 0.0000
402 E A -3.1731
403 R A -3.3844
404 L A 0.0000
405 Q A -2.8645
406 E A -3.7578
407 R A -3.1101
408 V A 0.0000
409 G A -3.2098
410 E A -3.7475
411 H A -2.5725
412 L A 0.0000
413 E A -3.2867
414 K A -3.0763
415 R A 0.0000
416 L A -0.3311
417 Q A -1.5239
418 A A -1.0173
419 S A -1.2839
420 E A 0.0000
421 R A -2.3317
422 H A -1.2819
423 T A -0.5438
424 F A 0.0894
425 A A -0.0874
426 S A -0.2786
427 L A -0.1909
428 D A -0.7390
429 E A -0.7908
430 A A 0.0000
431 L A 0.0000
432 L A 0.0000
433 A A -0.9086
434 L A 0.0000
435 D A -2.7902
436 D A -2.7397
437 S A -1.8060
438 M A 0.0000
439 L A 0.0000
440 T A -1.3689
441 S A -1.2945
442 V A 0.0000
443 A A -1.6328
444 Q A -2.2144
445 Q A -2.0276
446 N A 0.0000
447 P A -2.2261
448 E A -2.6499
449 I A -1.3719
450 T A 0.0000
451 D A -2.4012
452 G A -1.2880
453 A A 0.0000
454 V A -0.9741
455 A A -1.3495
456 F A 0.0000
457 R A -2.2694
458 Q A -2.9760
459 K A -3.4719
460 A A 0.0000
461 R A -3.9780
462 D A -4.1805
463 A A 0.0000
464 F A 0.0000
465 T A -1.7221
466 E A -1.8085
467 L A 0.0000
468 T A 0.5141
469 V A 1.5892
470 A A 0.0000
471 I A 0.0000
472 V A 1.7548
473 S A 1.2701
474 A A 0.0000
475 N A -0.6770
476 G A 0.1064
477 L A 0.9925
478 A A -0.5570
479 G A -1.2328
480 R A -2.5532
481 L A 0.0000
482 K A -2.4013
483 L A -1.2525
484 D A -1.8944
485 E A -2.7099
486 A A -1.6715
487 M A 0.0000
488 R A -3.1619
489 S A -2.5790
490 A A 0.0000
491 L A 0.0000
492 Q A -2.6731
493 R A -2.9474
494 L A 0.0000
495 D A -1.5793
496 A A -1.2385
497 L A -1.2300
498 A A -1.2160
499 D A -1.8438
500 T A -1.1499
501 P A -0.8221
502 E A -0.8652
503 R A -0.8408
504 L A -0.3271
505 A A -0.1345
506 W A -0.1664
507 L A 0.0000
508 A A 0.0000
509 A A -0.4113
510 E A -1.1768
511 L A 0.0000
512 N A -1.0720
513 H A -1.4018
514 A A -1.0961
515 D A -1.8594
516 N A -1.1401
517 V A 0.2127
518 D A -0.1424
519 H A 0.0000
520 Q A -1.3495
521 Q A -1.8727
522 L A 0.0000
523 L A 0.0000
524 D A -2.8437
525 A A -2.5159
526 M A 0.0000
527 R A -2.9881
528 G A -2.1648
529 Q A -2.1070
530 T A -1.1792
531 V A -0.9794
532 Q A -1.6203
533 S A 0.0000
534 P A -0.5341
535 V A 0.0000
536 L A 0.0000
537 A A -0.5142
538 A A 0.0057
539 A A 0.0000
540 L A -0.9302
541 A A -1.0593
542 E A -1.2543
543 A A -1.5105
544 Q A -1.6360
545 R A -2.0167
546 R A -2.1366
547 K A -1.4433
548 V A 0.0000
549 A A -1.1984
550 V A -0.6114
551 I A 0.0000
552 A A 0.0000
553 E A -1.1119
554 N A 0.0000
555 I A 0.0000
556 R A -0.7652
557 K A 0.0000
558 E A 0.0000
559 V A 0.0000
560 I A 0.0000
561 F A 0.0000
562 P A 0.0000
563 S A 0.0000
564 L A -0.5384
565 Y A -1.1253
566 R A -2.3322
567 P A -1.9139
568 G A -2.0460
569 Q A -2.7846
570 P A -2.4940
571 D A -2.4996
572 S A -2.1912
573 N A -1.7486
574 V A 0.0000
575 A A 0.0000
576 L A -1.8740
577 L A 0.0000
578 R A -1.8203
579 R A -2.7836
580 A A 0.0000
581 E A 0.0000
582 E A -3.6316
583 Q A -3.0544
584 L A 0.0000
585 R A -3.0864
586 H A -2.5845
587 A A -1.8303
588 T A -0.8163
589 S A -0.7819
590 P A -1.6554
591 A A -1.4480
592 E A -1.4889
593 I A 0.0000
594 N A -2.3958
595 Q A -2.0679
596 A A 0.0000
597 L A 0.0000
598 N A -2.0553
599 D A -1.6499
600 I A 0.0000
601 V A -1.4966
602 D A -1.9030
603 N A -1.0792
604 Y A -0.5694
605 S A -0.9282
606 A A -0.9303
607 R A -1.9788
608 G A -1.7904
609 F A -1.1724
610 L A 0.0000
611 R A -1.8055
612 F A -0.7395
613 G A 0.0000
614 K A -0.7359
615 P A -0.7015
616 L A 0.0000
617 S A -0.4438
618 S A -0.7161
619 T A -0.9058
620 T A 0.0000
621 V A 0.0000
622 E A -2.2916
623 M A -1.2117
624 A A 0.0000
625 K A -2.2207
626 A A -1.4257
627 W A -1.7362
628 R A -2.5535
629 N A -2.8433
630 K A -2.6763
631 E A -2.7254
632 F A 0.0000
633 T A -0.7870
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Laboratory of Theory of Biopolymers 2018