| Chain sequence(s) |
A: GPLPLNPEPELPSTDEYVTPTDLLYIAETDLLTEEGDPTKDIVVDGKVVVPRVSAYQYRVFLLKLPDPNKMPLPSPDAIDPSTEILIWRLLAFKIHVGGPLGVGTYGHPNFNKLGDVDNPTEPQHEGEDDTQNYSFTPKLKQEYIIGDEPPIGKYTAPADPAPGLPPGARPPLKTVTDIIEDGDIADIGFGARDYAALEPSKNRVPDIILDTKTKVFDYEGMKAEPTGNRMFTYDRYEKSKDVKKYVRSGPDLNPLPSSPPPSPLYVPPPPSSPYAVPPPTDYFTLPDRGEITEEDLLFNKPIYLKETEGKNNGILWHNRLYVTVLDNSRAEIETKTTRVYTPIPNVYDPSGYVTSRTYRREYRLSLIIQLCKIPLTPEVLDYISRLDPRILVDANLPFIPKVERPDPYAGKKFIEIDLTDKLSRRLEDYPLGREYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2101 | |
| 2 | P | A | 0.4210 | |
| 3 | L | A | 1.3938 | |
| 4 | P | A | 0.7170 | |
| 5 | L | A | 0.8496 | |
| 6 | N | A | -1.0216 | |
| 7 | P | A | -1.7324 | |
| 8 | E | A | -2.5837 | |
| 9 | P | A | -2.1783 | |
| 10 | E | A | -2.3358 | |
| 11 | L | A | -1.1966 | |
| 12 | P | A | -1.2744 | |
| 13 | S | A | -1.6115 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.9198 | |
| 16 | E | A | -2.7206 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9430 | |
| 20 | P | A | -0.9559 | |
| 21 | T | A | -0.9499 | |
| 22 | D | A | -1.7003 | |
| 23 | L | A | -0.8975 | |
| 24 | L | A | -0.7931 | |
| 25 | Y | A | 0.0000 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8159 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.4460 | |
| 31 | L | A | 0.0433 | |
| 32 | L | A | -0.0582 | |
| 33 | T | A | -1.0334 | |
| 34 | E | A | -1.9845 | |
| 35 | E | A | -2.7410 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.3673 | |
| 40 | K | A | -1.8511 | |
| 41 | D | A | -0.5444 | |
| 42 | I | A | 1.7098 | |
| 43 | V | A | 2.3802 | |
| 44 | V | A | 1.7310 | |
| 45 | D | A | -0.9599 | |
| 46 | G | A | -0.5223 | |
| 47 | K | A | -0.1435 | |
| 48 | V | A | 2.0675 | |
| 49 | V | A | 2.7336 | |
| 50 | V | A | 1.4423 | |
| 51 | P | A | -0.1642 | |
| 52 | R | A | -1.2014 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -1.9311 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | -1.4090 | |
| 67 | D | A | -1.3530 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.7877 | |
| 70 | K | A | -2.1260 | |
| 71 | M | A | -0.9536 | |
| 72 | P | A | -0.5898 | |
| 73 | L | A | -0.4585 | |
| 74 | P | A | -0.4159 | |
| 75 | S | A | -0.8217 | |
| 76 | P | A | -1.2728 | |
| 77 | D | A | -2.1123 | |
| 78 | A | A | -1.3036 | |
| 79 | I | A | -1.2338 | |
| 80 | D | A | -1.7841 | |
| 81 | P | A | -1.2514 | |
| 82 | S | A | -0.8205 | |
| 83 | T | A | -0.7639 | |
| 84 | E | A | -1.0223 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.2784 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.2975 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.8588 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.6907 | |
| 99 | G | A | -0.9928 | |
| 100 | P | A | -0.3120 | |
| 101 | L | A | 0.1511 | |
| 102 | G | A | 0.2888 | |
| 103 | V | A | 0.8345 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.0070 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8435 | |
| 108 | H | A | -1.6422 | |
| 109 | P | A | -1.7597 | |
| 110 | N | A | -2.7661 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | K | A | -1.0318 | |
| 114 | L | A | -0.9004 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7466 | |
| 117 | V | A | -1.4522 | |
| 118 | D | A | -2.4646 | |
| 119 | N | A | -2.5316 | |
| 120 | P | A | -1.8338 | |
| 121 | T | A | -1.5912 | |
| 122 | E | A | -2.1773 | |
| 123 | P | A | -0.9821 | |
| 124 | Q | A | -1.1367 | |
| 125 | H | A | -1.4597 | |
| 126 | E | A | -2.6565 | |
| 127 | G | A | -2.8710 | |
| 128 | E | A | -3.2918 | |
| 129 | D | A | -3.4467 | |
| 130 | D | A | -2.4956 | |
| 131 | T | A | -2.1522 | |
| 132 | Q | A | -2.0502 | |
| 133 | N | A | -2.0867 | |
| 134 | Y | A | -1.0699 | |
| 135 | S | A | -0.6137 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | 0.1078 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.4868 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.0813 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.7974 | |
| 155 | Y | A | 0.0000 | |
| 156 | T | A | -0.8044 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.6253 | |
| 159 | A | A | -0.8462 | |
| 160 | D | A | -1.9257 | |
| 161 | P | A | -1.1721 | |
| 162 | A | A | -0.6112 | |
| 163 | P | A | -0.6060 | |
| 164 | G | A | -0.3921 | |
| 165 | L | A | -0.2343 | |
| 166 | P | A | -0.5631 | |
| 167 | P | A | -0.7577 | |
| 168 | G | A | -0.7966 | |
| 169 | A | A | -0.9107 | |
| 170 | R | A | -1.5749 | |
| 171 | P | A | -1.1177 | |
| 172 | P | A | -0.5171 | |
| 173 | L | A | 0.1942 | |
| 174 | K | A | -0.9035 | |
| 175 | T | A | -0.5226 | |
| 176 | V | A | -0.4049 | |
| 177 | T | A | -0.5103 | |
| 178 | D | A | -0.6309 | |
| 179 | I | A | -0.5346 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0671 | |
| 182 | D | A | 0.0000 | |
| 183 | G | A | -0.5770 | |
| 184 | D | A | -0.7742 | |
| 185 | I | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3902 | |
| 190 | F | A | -0.1791 | |
| 191 | G | A | -0.4091 | |
| 192 | A | A | -0.9536 | |
| 193 | R | A | -1.6558 | |
| 194 | D | A | -1.4928 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.5218 | |
| 197 | A | A | -0.6249 | |
| 198 | L | A | -0.7277 | |
| 199 | E | A | -1.3150 | |
| 200 | P | A | -1.2134 | |
| 201 | S | A | -1.3231 | |
| 202 | K | A | -2.7143 | |
| 203 | N | A | -2.0990 | |
| 204 | R | A | -1.5889 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7351 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.8769 | |
| 211 | D | A | -2.3294 | |
| 212 | T | A | -1.6703 | |
| 213 | K | A | -1.9632 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0078 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -1.0260 | |
| 219 | Y | A | -1.2660 | |
| 220 | E | A | -2.4569 | |
| 221 | G | A | -1.6447 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.6882 | |
| 224 | A | A | -1.4428 | |
| 225 | E | A | -1.3073 | |
| 226 | P | A | -0.9361 | |
| 227 | T | A | -0.7644 | |
| 228 | G | A | 0.0000 | |
| 229 | N | A | 0.0000 | |
| 230 | R | A | -0.5669 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.6156 | |
| 234 | Y | A | -0.6771 | |
| 235 | D | A | -1.5152 | |
| 236 | R | A | -2.4114 | |
| 237 | Y | A | -1.7671 | |
| 238 | E | A | -2.4852 | |
| 239 | K | A | -2.3300 | |
| 240 | S | A | -2.5002 | |
| 241 | K | A | -3.1275 | |
| 242 | D | A | -2.8615 | |
| 243 | V | A | -1.5529 | |
| 244 | K | A | -2.3322 | |
| 245 | K | A | -2.1589 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | S | A | -1.5093 | |
| 250 | G | A | -1.2220 | |
| 251 | P | A | -0.9512 | |
| 252 | D | A | -0.9506 | |
| 253 | L | A | -0.0905 | |
| 254 | N | A | -1.0169 | |
| 255 | P | A | -0.8390 | |
| 256 | L | A | 0.2719 | |
| 257 | P | A | -0.2736 | |
| 258 | S | A | -0.0910 | |
| 259 | S | A | -0.5469 | |
| 260 | P | A | -0.3448 | |
| 261 | P | A | -0.4394 | |
| 262 | P | A | 0.0975 | |
| 263 | S | A | 0.6047 | |
| 264 | P | A | 0.7434 | |
| 265 | L | A | 1.8885 | |
| 266 | Y | A | 1.7569 | |
| 267 | V | A | 1.9221 | |
| 268 | P | A | 0.9936 | |
| 269 | P | A | 0.5964 | |
| 270 | P | A | -0.1694 | |
| 271 | P | A | -0.1014 | |
| 272 | S | A | -0.1216 | |
| 273 | S | A | 0.2687 | |
| 274 | P | A | 0.2264 | |
| 275 | Y | A | 1.2802 | |
| 276 | A | A | 1.1271 | |
| 277 | V | A | 1.7305 | |
| 278 | P | A | 0.8746 | |
| 279 | P | A | -0.0346 | |
| 280 | P | A | -0.6000 | |
| 281 | T | A | -0.4176 | |
| 282 | D | A | -0.5023 | |
| 283 | Y | A | 0.6889 | |
| 284 | F | A | 0.1362 | |
| 285 | T | A | -0.9895 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.9085 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.6685 | |
| 291 | E | A | -1.9463 | |
| 292 | I | A | -1.2256 | |
| 293 | T | A | -1.8294 | |
| 294 | E | A | -2.6190 | |
| 295 | E | A | -2.7545 | |
| 296 | D | A | -2.0781 | |
| 297 | L | A | -1.1654 | |
| 298 | L | A | -1.1686 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.4240 | |
| 301 | K | A | -1.8150 | |
| 302 | P | A | -0.8827 | |
| 303 | I | A | -0.1726 | |
| 304 | Y | A | -0.3429 | |
| 305 | L | A | 0.0000 | |
| 306 | K | A | -2.4441 | |
| 307 | E | A | -3.2781 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.6647 | |
| 310 | G | A | -1.9723 | |
| 311 | K | A | -1.6943 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9352 | |
| 319 | N | A | -0.9586 | |
| 320 | R | A | -1.3664 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | -0.3726 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.5621 | |
| 333 | I | A | -1.9119 | |
| 334 | E | A | -3.1618 | |
| 335 | T | A | -2.4847 | |
| 336 | K | A | -2.2634 | |
| 337 | T | A | -0.6084 | |
| 338 | T | A | -0.0092 | |
| 339 | R | A | 0.4063 | |
| 340 | V | A | 1.9422 | |
| 341 | Y | A | 1.2420 | |
| 342 | T | A | 0.7145 | |
| 343 | P | A | 0.6525 | |
| 344 | I | A | 1.9474 | |
| 345 | P | A | 1.0503 | |
| 346 | N | A | 0.2153 | |
| 347 | V | A | 1.8302 | |
| 348 | Y | A | 1.6805 | |
| 349 | D | A | 0.1485 | |
| 350 | P | A | 0.1536 | |
| 351 | S | A | 0.1936 | |
| 352 | G | A | 0.0000 | |
| 353 | Y | A | 0.9383 | |
| 354 | V | A | 1.5496 | |
| 355 | T | A | -0.2524 | |
| 356 | S | A | -1.2429 | |
| 357 | R | A | -2.3011 | |
| 358 | T | A | -2.4660 | |
| 359 | Y | A | 0.0000 | |
| 360 | R | A | -3.0478 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -1.0080 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -0.9997 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.4292 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6431 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6282 | |
| 376 | L | A | -0.5427 | |
| 377 | T | A | -0.8671 | |
| 378 | P | A | -1.4357 | |
| 379 | E | A | -2.3323 | |
| 380 | V | A | -1.5712 | |
| 381 | L | A | -1.3698 | |
| 382 | D | A | -2.5609 | |
| 383 | Y | A | 0.0000 | |
| 384 | I | A | 0.0000 | |
| 385 | S | A | -1.6251 | |
| 386 | R | A | -2.1711 | |
| 387 | L | A | -1.0166 | |
| 388 | D | A | -0.7725 | |
| 389 | P | A | -1.1579 | |
| 390 | R | A | -1.5818 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.2144 | |
| 394 | D | A | -2.0285 | |
| 395 | A | A | -1.4383 | |
| 396 | N | A | -1.8218 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2500 | |
| 399 | F | A | 1.5994 | |
| 400 | I | A | 0.6716 | |
| 401 | P | A | -0.2429 | |
| 402 | K | A | -1.6920 | |
| 403 | V | A | -0.4457 | |
| 404 | E | A | -2.6309 | |
| 405 | R | A | -2.8657 | |
| 406 | P | A | -1.8412 | |
| 407 | D | A | -1.7367 | |
| 408 | P | A | -0.9790 | |
| 409 | Y | A | -0.7669 | |
| 410 | A | A | -0.9042 | |
| 411 | G | A | -1.2278 | |
| 412 | K | A | -1.7264 | |
| 413 | K | A | -2.2915 | |
| 414 | F | A | -1.2592 | |
| 415 | I | A | -0.9987 | |
| 416 | E | A | -2.4035 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.8700 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.7231 | |
| 421 | D | A | -2.3037 | |
| 422 | K | A | -1.8318 | |
| 423 | L | A | -1.1336 | |
| 424 | S | A | -1.9625 | |
| 425 | R | A | -2.7434 | |
| 426 | R | A | -3.6454 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.6908 | |
| 429 | D | A | -3.2224 | |
| 430 | Y | A | -1.9000 | |
| 431 | P | A | -1.3531 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.8824 | |
| 435 | E | A | -2.0809 | |
| 436 | Y | A | -0.9325 | |
| 437 | L | A | -0.5803 | |
| 438 | N | A | -2.1495 | |
| 439 | R | A | -2.2415 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine