| Chain sequence(s) |
A: MMMPANFTAVNSEVVYGGADLFSILADTTAPVWGAANVKKFNTNLITLVSNSFFQKTIDNTLGVMFSGNWGEDNKLFGEEGSLNQKMFGLWTKKADGSLDTRTDDMNFGNKVMQVLGMASVAYTLGTTDAKVGFNDKVAG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.7904 | |
| 2 | M | A | 2.0216 | |
| 3 | M | A | 1.5556 | |
| 4 | P | A | 0.6033 | |
| 5 | A | A | 0.4739 | |
| 6 | N | A | -0.0495 | |
| 7 | F | A | 1.5632 | |
| 8 | T | A | 0.4226 | |
| 9 | A | A | 0.5595 | |
| 10 | V | A | 1.6021 | |
| 11 | N | A | 0.3419 | |
| 12 | S | A | 0.1357 | |
| 13 | E | A | -0.3860 | |
| 14 | V | A | 1.6584 | |
| 15 | V | A | 2.1310 | |
| 16 | Y | A | 1.1760 | |
| 17 | G | A | 0.1956 | |
| 18 | G | A | -0.2657 | |
| 19 | A | A | -0.0640 | |
| 20 | D | A | -0.2582 | |
| 21 | L | A | 2.0619 | |
| 22 | F | A | 2.3391 | |
| 23 | S | A | 0.8285 | |
| 24 | I | A | 1.2949 | |
| 25 | L | A | 1.5505 | |
| 26 | A | A | 0.6547 | |
| 27 | D | A | -0.9080 | |
| 28 | T | A | 0.1870 | |
| 29 | T | A | 0.6511 | |
| 30 | A | A | 0.4901 | |
| 31 | P | A | 0.4730 | |
| 32 | V | A | 1.8214 | |
| 33 | W | A | 1.8000 | |
| 34 | G | A | 0.3075 | |
| 35 | A | A | -0.1765 | |
| 36 | A | A | -0.7564 | |
| 37 | N | A | -0.8223 | |
| 38 | V | A | -0.4551 | |
| 39 | K | A | -2.1805 | |
| 40 | K | A | -1.9570 | |
| 41 | F | A | 0.4901 | |
| 42 | N | A | -0.2329 | |
| 43 | T | A | -0.1343 | |
| 44 | N | A | 0.4969 | |
| 45 | L | A | 2.2653 | |
| 46 | I | A | 2.7307 | |
| 47 | T | A | 1.7395 | |
| 48 | L | A | 2.5946 | |
| 49 | V | A | 2.5666 | |
| 50 | S | A | 0.9480 | |
| 51 | N | A | 0.2902 | |
| 52 | S | A | 0.0209 | |
| 53 | F | A | 1.5321 | |
| 54 | F | A | 0.9580 | |
| 55 | Q | A | -1.0828 | |
| 56 | K | A | -2.0249 | |
| 57 | T | A | -0.6125 | |
| 58 | I | A | -0.2907 | |
| 59 | D | A | -1.7990 | |
| 60 | N | A | -1.8781 | |
| 61 | T | A | -0.1068 | |
| 62 | L | A | 1.2577 | |
| 63 | G | A | 0.3418 | |
| 64 | V | A | 1.0225 | |
| 65 | M | A | 2.2738 | |
| 66 | F | A | 2.7795 | |
| 67 | S | A | 1.0849 | |
| 68 | G | A | 0.0000 | |
| 69 | N | A | -0.9769 | |
| 70 | W | A | 0.1905 | |
| 71 | G | A | -1.8958 | |
| 72 | E | A | -3.2466 | |
| 73 | D | A | -3.5142 | |
| 74 | N | A | -3.1150 | |
| 75 | K | A | -2.1154 | |
| 76 | L | A | 0.0674 | |
| 77 | F | A | 0.8208 | |
| 78 | G | A | -1.1249 | |
| 79 | E | A | -2.6600 | |
| 80 | E | A | -2.8667 | |
| 81 | G | A | 0.0000 | |
| 82 | S | A | -0.9833 | |
| 83 | L | A | -0.0668 | |
| 84 | N | A | 0.0000 | |
| 85 | Q | A | -1.4013 | |
| 86 | K | A | -1.1391 | |
| 87 | M | A | 0.0402 | |
| 88 | F | A | -0.1746 | |
| 89 | G | A | -0.6728 | |
| 90 | L | A | -0.0510 | |
| 91 | W | A | -0.8626 | |
| 92 | T | A | -1.6662 | |
| 93 | K | A | -3.0089 | |
| 94 | K | A | -2.9748 | |
| 95 | A | A | -1.8896 | |
| 96 | D | A | -2.2071 | |
| 97 | G | A | -2.0553 | |
| 98 | S | A | -0.8326 | |
| 99 | L | A | -0.2858 | |
| 100 | D | A | -2.0355 | |
| 101 | T | A | -1.2819 | |
| 102 | R | A | -1.0683 | |
| 103 | T | A | -1.1360 | |
| 104 | D | A | -1.8078 | |
| 105 | D | A | -1.2405 | |
| 106 | M | A | -0.6664 | |
| 107 | N | A | -0.9582 | |
| 108 | F | A | 0.9966 | |
| 109 | G | A | -0.0417 | |
| 110 | N | A | -0.5481 | |
| 111 | K | A | 0.4545 | |
| 112 | V | A | 1.6036 | |
| 113 | M | A | 1.7751 | |
| 114 | Q | A | 1.0827 | |
| 115 | V | A | 2.3542 | |
| 116 | L | A | 2.6209 | |
| 117 | G | A | 1.8925 | |
| 118 | M | A | 2.0594 | |
| 119 | A | A | 2.1399 | |
| 120 | S | A | 1.9621 | |
| 121 | V | A | 2.9070 | |
| 122 | A | A | 2.1312 | |
| 123 | Y | A | 2.1673 | |
| 124 | T | A | 1.4134 | |
| 125 | L | A | 1.8403 | |
| 126 | G | A | 0.3917 | |
| 127 | T | A | -0.0112 | |
| 128 | T | A | -0.5425 | |
| 129 | D | A | -1.5141 | |
| 130 | A | A | -0.8316 | |
| 131 | K | A | -1.4989 | |
| 132 | V | A | -0.1509 | |
| 133 | G | A | -0.5125 | |
| 134 | F | A | 0.3266 | |
| 135 | N | A | -1.1788 | |
| 136 | D | A | -2.0981 | |
| 137 | K | A | -1.5646 | |
| 138 | V | A | 0.2081 | |
| 139 | A | A | -0.4191 | |
| 140 | G | A | -0.7527 |